Cre12.g550750 (30792613)


Aliases : 30792613

Description : Succinate dehydrogenase assembly factor 2, mitochondrial OS=Arabidopsis thaliana


Gene families : OG_01_0003501 (OrthoFinder) Phylogenetic Tree(s): OG0003501_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre12.g550750
Cluster HCCA: Cluster_54

Target Alias Description ECC score Gene Family Method Actions
Sro2939_g340650.1 Contig2223.g18461 Flavinator of succinate dehydrogenase 0.01 OrthoFinder
lcl|LHPG02000011.1_cds_PRW45533.1_1413 PRW45533 Ankyrin repeat family isoform B 0.02 OrthoFinder
lcl|VRMN01000008.1_cds_KAA8492944.1_2680 KAA8492944 Succinate dehydrogenase assembly factor 2, mitochondrial 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP Enrichment
MF GO:0004126 cytidine deaminase activity IEP Enrichment
MF GO:0004427 inorganic diphosphatase activity IEP Enrichment
MF GO:0004451 isocitrate lyase activity IEP Enrichment
MF GO:0004611 phosphoenolpyruvate carboxykinase activity IEP Enrichment
MF GO:0004612 phosphoenolpyruvate carboxykinase (ATP) activity IEP Enrichment
CC GO:0005737 cytoplasm IEP Enrichment
CC GO:0005779 integral component of peroxisomal membrane IEP Enrichment
CC GO:0016021 integral component of membrane IEP Enrichment
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEP Enrichment
MF GO:0016814 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines IEP Enrichment
MF GO:0016829 lyase activity IEP Enrichment
MF GO:0016830 carbon-carbon lyase activity IEP Enrichment
MF GO:0016831 carboxy-lyase activity IEP Enrichment
MF GO:0016833 oxo-acid-lyase activity IEP Enrichment
MF GO:0019239 deaminase activity IEP Enrichment
CC GO:0031224 intrinsic component of membrane IEP Enrichment
CC GO:0031231 intrinsic component of peroxisomal membrane IEP Enrichment
CC GO:0031300 intrinsic component of organelle membrane IEP Enrichment
CC GO:0031301 integral component of organelle membrane IEP Enrichment
MF GO:0043169 cation binding IEP Enrichment
MF GO:0046872 metal ion binding IEP Enrichment
CC GO:0110165 cellular anatomical entity IEP Enrichment
InterPro domains Description Start Stop
IPR005631 SDH 54 123
No external refs found!