Cre12.g549700 (30791977)


Aliases : 30791977

Description : Protein biosynthesis.cytosolic ribosome.small subunit (SSU).SSU processome.pre-40S subunit nuclear export.Dim2 export factor


Gene families : OG_01_0003127 (OrthoFinder) Phylogenetic Tree(s): OG0003127_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre12.g549700
Cluster HCCA: Cluster_17

Target Alias Description ECC score Gene Family Method Actions
Dusal.0153s00022.1 33203329 Krr1, KH1 domain [Interproscan]. 0.03 OrthoFinder
OT_07G03000.1 No alias Krr1, KH1 domain [Interproscan]. 0.03 OrthoFinder
PTI_02G00840.1 No alias Krr1, KH1 domain [Interproscan]. 0.07 OrthoFinder
Sro203_g085730.1 Contig1270.g11867 Protein PNO1 0.03 OrthoFinder
TP06G03210.1 No alias Krr1, KH1 domain [Interproscan]. 0.02 OrthoFinder
XM_002499601.1 MICPUN_56017, 56017 Kh-domain-containing protein 0.04 OrthoFinder
XM_003058130.1 MicpuC2_16093, 16093 Krr1, KH1 domain [Interproscan]. 0.03 OrthoFinder
lcl|LHPG02000003.1_cds_PRW60165.1_6533 PRW60165 Pre-rRNA-processing PNO1 0.06 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Enrichment
MF GO:0003674 molecular_function IEP Enrichment
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003937 IMP cyclohydrolase activity IEP Enrichment
MF GO:0004325 ferrochelatase activity IEP Enrichment
MF GO:0004386 helicase activity IEP Enrichment
MF GO:0004643 phosphoribosylaminoimidazolecarboxamide formyltransferase activity IEP Enrichment
MF GO:0005244 voltage-gated ion channel activity IEP Enrichment
MF GO:0005247 voltage-gated chloride channel activity IEP Enrichment
MF GO:0005253 anion channel activity IEP Enrichment
MF GO:0005254 chloride channel activity IEP Enrichment
MF GO:0005488 binding IEP Enrichment
MF GO:0005524 ATP binding IEP Enrichment
BP GO:0006820 anion transport IEP Enrichment
BP GO:0006821 chloride transport IEP Enrichment
MF GO:0008094 ATPase, acting on DNA IEP Enrichment
MF GO:0008252 nucleotidase activity IEP Enrichment
MF GO:0008253 5'-nucleotidase activity IEP Enrichment
MF GO:0008308 voltage-gated anion channel activity IEP Enrichment
MF GO:0008509 anion transmembrane transporter activity IEP Enrichment
MF GO:0008686 3,4-dihydroxy-2-butanone-4-phosphate synthase activity IEP Enrichment
MF GO:0015103 inorganic anion transmembrane transporter activity IEP Enrichment
BP GO:0015698 inorganic anion transport IEP Enrichment
MF GO:0016742 hydroxymethyl-, formyl- and related transferase activity IEP Enrichment
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEP Enrichment
MF GO:0016814 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines IEP Enrichment
MF GO:0016829 lyase activity IEP Enrichment
MF GO:0016830 carbon-carbon lyase activity IEP Enrichment
MF GO:0016887 ATPase IEP Enrichment
MF GO:0017076 purine nucleotide binding IEP Enrichment
MF GO:0019238 cyclohydrolase activity IEP Enrichment
MF GO:0022832 voltage-gated channel activity IEP Enrichment
MF GO:0022836 gated channel activity IEP Enrichment
MF GO:0030554 adenyl nucleotide binding IEP Enrichment
MF GO:0032553 ribonucleotide binding IEP Enrichment
MF GO:0032555 purine ribonucleotide binding IEP Enrichment
MF GO:0032559 adenyl ribonucleotide binding IEP Enrichment
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Enrichment
MF GO:0036094 small molecule binding IEP Enrichment
MF GO:0043167 ion binding IEP Enrichment
MF GO:0043168 anion binding IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
MF GO:0097367 carbohydrate derivative binding IEP Enrichment
MF GO:1901265 nucleoside phosphate binding IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment

No InterPro domains available for this sequence

No external refs found!