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  5. Cre12.g544700

Cre12.g544700 (30792000, PUF3)


Aliases : 30792000, PUF3

Description : Pumilio homolog 12 OS=Arabidopsis thaliana


Gene families : OG_01_0000430 (OrthoFinder) Phylogenetic Tree(s): OG0000430_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre12.g544700
Cluster HCCA: Cluster_143

Target Alias Description ECC score Gene Family Method Actions
Dusal.4248s00001.1 33189045 Hypothetical protein 0.02 OrthoFinder
Sro29_g018990.1 Contig1384.g12742 Pumilio homolog 0.01 OrthoFinder
SymbC1.scaffold6862.2 6862.2 Pumilio RNA-binding repeat [Interproscan]. 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000439 transcription factor TFIIH core complex IEP Enrichment
MF GO:0001671 ATPase activator activity IEP Enrichment
CC GO:0005667 transcription regulator complex IEP Enrichment
BP GO:0006869 lipid transport IEP Enrichment
MF GO:0008047 enzyme activator activity IEP Enrichment
MF GO:0030234 enzyme regulator activity IEP Enrichment
MF GO:0042910 xenobiotic transmembrane transporter activity IEP Enrichment
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP Enrichment
MF GO:0060590 ATPase regulator activity IEP Enrichment
BP GO:0061024 membrane organization IEP Enrichment
CC GO:0090575 RNA polymerase II transcription regulator complex IEP Enrichment
MF GO:0098772 molecular function regulator IEP Enrichment
BP GO:0120009 intermembrane lipid transfer IEP Enrichment
InterPro domains Description Start Stop
IPR001313 Pumilio_RNA-bd_rpt 617 649
IPR001313 Pumilio_RNA-bd_rpt 692 711
IPR001313 Pumilio_RNA-bd_rpt 657 684
IPR001313 Pumilio_RNA-bd_rpt 581 609
IPR001313 Pumilio_RNA-bd_rpt 542 571
No external refs found!