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  5. Cre12.g542250

Cre12.g542250 (30793243, TUB1)


Aliases : 30793243, TUB1

Description : Cytoskeleton.microtubular network.alpha-beta-Tubulin heterodimer.beta-Tubulin component


Gene families : OG_01_0001157 (OrthoFinder) Phylogenetic Tree(s): OG0001157_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre12.g542250
Cluster HCCA: Cluster_20

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00001067.14 tig00001067_g6773.t1 Cytoskeleton.microtubular network.alpha-beta-Tubulin... 0.02 OrthoFinder
Cpa|evm.model.tig00001067.6 tig00001067_g6764.t1 Cytoskeleton.microtubular network.alpha-beta-Tubulin... 0.02 OrthoFinder
EOD11672 No alias Beta tubulin [Ensembl]. 0.03 OrthoFinder
EOD12626 No alias Tubulin/FtsZ, 2-layer sandwich domain; Tubulin/FtsZ,... 0.02 OrthoFinder
EOD18865 No alias Tubulin/FtsZ, 2-layer sandwich domain; Tubulin/FtsZ,... 0.01 OrthoFinder
EOD26804 No alias Tubulin/FtsZ, 2-layer sandwich domain; Tubulin/FtsZ,... 0.01 OrthoFinder
EOD36675 No alias Tubulin/FtsZ, 2-layer sandwich domain; Tubulin/FtsZ,... 0.05 OrthoFinder
TP01G08660.1 No alias Tubulin/FtsZ, 2-layer sandwich domain; Tubulin/FtsZ,... 0.02 OrthoFinder
Vocar.0007s0110.1 32888229 Tubulin/FtsZ, GTPase domain; Tubulin/FtsZ, 2-layer... 0.04 OrthoFinder
XM_002507645.1 MICPUN_104730, 104730 Tubulin beta chain (TUBB) 0.02 OrthoFinder
lcl|BLLF01002468.1_cds_GFH24185.1_18662 HaLaN_21930, GFH24185 Tubulin beta chain 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004089 carbonate dehydratase activity IEP Enrichment
CC GO:0005875 microtubule associated complex IEP Enrichment
CC GO:0005929 cilium IEP Enrichment
BP GO:0007017 microtubule-based process IEP Enrichment
MF GO:0016836 hydro-lyase activity IEP Enrichment
CC GO:0030286 dynein complex IEP Enrichment
CC GO:0031514 motile cilium IEP Enrichment
CC GO:0042995 cell projection IEP Enrichment
CC GO:0120025 plasma membrane bounded cell projection IEP Enrichment
InterPro domains Description Start Stop
IPR018316 Tubulin/FtsZ_2-layer-sand-dom 261 382
IPR003008 Tubulin_FtsZ_GTPase 3 211
No external refs found!