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  5. Cre12.g535900

Cre12.g535900 (30792839, ARL1)


Aliases : 30792839, ARL1

Description : Vesicle trafficking.Coat protein I (COPI) coatomer machinery.coat protein recruiting.ARF-GTPase


Gene families : OG_01_0000272 (OrthoFinder) Phylogenetic Tree(s): OG0000272_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre12.g535900
Cluster HCCA: Cluster_27

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00001093.2 tig00001093_g6877.t1 Vesicle trafficking.Coat protein I (COPI) coatomer... 0.02 OrthoFinder
Cz05g21190.t1 No alias Small GTPase superfamily, ARF/SAR type [Interproscan]. 0.05 OrthoFinder
Sro229_g093190.1 Contig429.g5823 ADP-ribosylation factor 0.01 OrthoFinder
Sro255_g100410.1 Contig2336.g19218 Ribosylation factor 1 0.02 OrthoFinder
Sro2696_g334940.1 Contig3104.g24693 ADP-ribosylation factor 0.03 OrthoFinder
Sro339_g120980.1 Contig3791.g29104 Ribosylation factor 1 0.03 OrthoFinder
Sro695_g188620.1 Contig4098.g31309 ADP-ribosylation factor 0.02 OrthoFinder
SymbC1.scaffold1911.3 1911.3 Small GTPase superfamily, ARF/SAR type [Interproscan]. 0.01 OrthoFinder
XM_002502226.1 MICPUN_94315, 94315 Small GTPase superfamily, ARF/SAR type [Interproscan]. 0.03 OrthoFinder
XM_002503758.1 MICPUN_83378, 83378 Small GTPase superfamily, ARF/SAR type [Interproscan]. 0.02 OrthoFinder
XM_003055367.1 MicpuC2_30690, 30690 Small GTPase superfamily, ARF/SAR type [Interproscan]. 0.02 OrthoFinder
XM_003063983.1 MicpuC2_30191, 30191 Small GTPase superfamily, ARF/SAR type [Interproscan]. 0.03 OrthoFinder
lcl|LHPG02000013.1_cds_PRW44304.1_2340 PRW44304 Arf6-family small GTPase 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000139 Golgi membrane IEP Enrichment
MF GO:0003924 GTPase activity IEP Enrichment
MF GO:0005198 structural molecule activity IEP Enrichment
MF GO:0005338 nucleotide-sugar transmembrane transporter activity IEP Enrichment
MF GO:0005515 protein binding IEP Enrichment
CC GO:0005575 cellular_component IEP Enrichment
CC GO:0005787 signal peptidase complex IEP Enrichment
BP GO:0006465 signal peptide processing IEP Enrichment
BP GO:0006518 peptide metabolic process IEP Enrichment
BP GO:0006621 protein retention in ER lumen IEP Enrichment
BP GO:0006810 transport IEP Enrichment
BP GO:0006886 intracellular protein transport IEP Enrichment
BP GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IEP Enrichment
BP GO:0006890 retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum IEP Enrichment
BP GO:0008104 protein localization IEP Enrichment
BP GO:0008150 biological_process IEP Enrichment
MF GO:0008963 phospho-N-acetylmuramoyl-pentapeptide-transferase activity IEP Enrichment
BP GO:0009987 cellular process IEP Enrichment
BP GO:0015031 protein transport IEP Enrichment
MF GO:0015165 pyrimidine nucleotide-sugar transmembrane transporter activity IEP Enrichment
MF GO:0015932 nucleobase-containing compound transmembrane transporter activity IEP Enrichment
CC GO:0016021 integral component of membrane IEP Enrichment
BP GO:0016192 vesicle-mediated transport IEP Enrichment
MF GO:0016462 pyrophosphatase activity IEP Enrichment
BP GO:0016485 protein processing IEP Enrichment
MF GO:0016780 phosphotransferase activity, for other substituted phosphate groups IEP Enrichment
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Enrichment
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Enrichment
MF GO:0017111 nucleoside-triphosphatase activity IEP Enrichment
CC GO:0030117 membrane coat IEP Enrichment
CC GO:0030118 clathrin coat IEP Enrichment
CC GO:0030120 vesicle coat IEP Enrichment
CC GO:0030125 clathrin vesicle coat IEP Enrichment
CC GO:0030126 COPI vesicle coat IEP Enrichment
CC GO:0030127 COPII vesicle coat IEP Enrichment
CC GO:0030130 clathrin coat of trans-Golgi network vesicle IEP Enrichment
CC GO:0031224 intrinsic component of membrane IEP Enrichment
BP GO:0032507 maintenance of protein location in cell IEP Enrichment
CC GO:0032991 protein-containing complex IEP Enrichment
BP GO:0033036 macromolecule localization IEP Enrichment
BP GO:0035437 maintenance of protein localization in endoplasmic reticulum IEP Enrichment
BP GO:0043603 cellular amide metabolic process IEP Enrichment
BP GO:0044267 cellular protein metabolic process IEP Enrichment
BP GO:0045184 establishment of protein localization IEP Enrichment
BP GO:0045185 maintenance of protein location IEP Enrichment
BP GO:0046907 intracellular transport IEP Enrichment
BP GO:0048193 Golgi vesicle transport IEP Enrichment
BP GO:0051179 localization IEP Enrichment
BP GO:0051234 establishment of localization IEP Enrichment
BP GO:0051235 maintenance of location IEP Enrichment
BP GO:0051604 protein maturation IEP Enrichment
BP GO:0051641 cellular localization IEP Enrichment
BP GO:0051649 establishment of localization in cell IEP Enrichment
BP GO:0051651 maintenance of location in cell IEP Enrichment
BP GO:0071702 organic substance transport IEP Enrichment
BP GO:0071705 nitrogen compound transport IEP Enrichment
BP GO:0072595 maintenance of protein localization in organelle IEP Enrichment
CC GO:0098588 bounding membrane of organelle IEP Enrichment
CC GO:0098796 membrane protein complex IEP Enrichment
CC GO:0110165 cellular anatomical entity IEP Enrichment
CC GO:0140534 endoplasmic reticulum protein-containing complex IEP Enrichment
MF GO:1901505 carbohydrate derivative transmembrane transporter activity IEP Enrichment
CC GO:1905368 peptidase complex IEP Enrichment
InterPro domains Description Start Stop
IPR006689 Small_GTPase_ARF/SAR 9 175
No external refs found!