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  5. Cre12.g534151

Cre12.g534151 (30792955)


Aliases : 30792955

Description : DNA damage response.DNA repair mechanisms.base excision repair (BER).apurinic/apyrimidinic (AP) endonuclease activities.APE2 AP-endonuclease


Gene families : OG_01_0000344 (OrthoFinder) Phylogenetic Tree(s): OG0000344_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre12.g534151
Cluster HCCA: Cluster_91

Target Alias Description ECC score Gene Family Method Actions
Dusal.0676s00009.1 33185524 Hypothetical protein 0.02 OrthoFinder
EOD10050 No alias Endonuclease/exonuclease/phosphatase [Interproscan]. 0.01 OrthoFinder
OT_04G05230.1 No alias Zinc finger, GRF-type [Interproscan]. 0.04 OrthoFinder
Sro237_g095280.1 Contig1864.g16299 Lyase 0.02 OrthoFinder
XM_002501230.1 MICPUN_80905, 80905 Endonuclease/exonuclease/phosphatase [Interproscan]. 0.03 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003678 DNA helicase activity IEP Enrichment
MF GO:0003968 RNA-directed 5'-3' RNA polymerase activity IEP Enrichment
MF GO:0004518 nuclease activity IEP Enrichment
MF GO:0004519 endonuclease activity IEP Enrichment
MF GO:0005524 ATP binding IEP Enrichment
BP GO:0006259 DNA metabolic process IEP Enrichment
BP GO:0006260 DNA replication IEP Enrichment
BP GO:0006281 DNA repair IEP Enrichment
BP GO:0006298 mismatch repair IEP Enrichment
BP GO:0006950 response to stress IEP Enrichment
BP GO:0006974 cellular response to DNA damage stimulus IEP Enrichment
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Enrichment
MF GO:0017076 purine nucleotide binding IEP Enrichment
MF GO:0030554 adenyl nucleotide binding IEP Enrichment
MF GO:0032553 ribonucleotide binding IEP Enrichment
MF GO:0032555 purine ribonucleotide binding IEP Enrichment
MF GO:0032559 adenyl ribonucleotide binding IEP Enrichment
BP GO:0033554 cellular response to stress IEP Enrichment
MF GO:0034062 5'-3' RNA polymerase activity IEP Enrichment
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Enrichment
BP GO:0050896 response to stimulus IEP Enrichment
BP GO:0051716 cellular response to stimulus IEP Enrichment
MF GO:0097367 carbohydrate derivative binding IEP Enrichment
MF GO:0097747 RNA polymerase activity IEP Enrichment
InterPro domains Description Start Stop
IPR005135 Endo/exonuclease/phosphatase 6 317
No external refs found!