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Aliases : 30791692, RPL13a
Description : Protein biosynthesis.cytosolic ribosome.large subunit (LSU).LSU proteome component.RPL13a component
Gene families : OG_01_0003121 (OrthoFinder) Phylogenetic Tree(s): OG0003121_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Cre12.g532550 | |
| Cluster | HCCA: Cluster_32 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Cpa|evm.model.tig00000792.29 | tig00000792_g4178.t1 | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.27 | OrthoFinder | |
| Cz05g22130.t1 | No alias | Hypothetical protein | 0.15 | OrthoFinder | |
| EOD25270 | No alias | Ribosomal protein L13 [Interproscan]. | 0.04 | OrthoFinder | |
| EOD35558 | No alias | Ribosomal protein L13 [Interproscan]. | 0.04 | OrthoFinder | |
| OT_12G02420.1 | No alias | Ribosomal protein L13 [Interproscan]. | 0.11 | OrthoFinder | |
| PTI_02G04390.1 | No alias | Ribosomal protein L13 [Interproscan]. | 0.26 | OrthoFinder | |
| Sro678_g186000.1 | Contig2726.g21985 | 60S ribosomal protein L13a (Fragment) | 0.26 | OrthoFinder | |
| SymbC1.scaffold1593.4 | 1593.4 | Hypothetical protein | 0.02 | OrthoFinder | |
| TP04G09050.1 | No alias | Hypothetical protein | 0.29 | OrthoFinder | |
| Vocar.0017s0012.1 | 32891353 | Ribosomal protein L13 [Interproscan]. | 0.18 | OrthoFinder | |
| XM_002507201.1 | MICPUN_93104, 93104 | Ribosomal protein L13 [Interproscan]. | 0.17 | OrthoFinder | |
| XM_003054776.1 | MicpuC2_30605, 30605 | Ribosomal protein L13 [Interproscan]. | 0.04 | OrthoFinder | |
| lcl|LHPG02000004.1_cds_PRW58824.1_7345 | PRW58824 | 60S ribosomal L13a-4 | 0.09 | OrthoFinder | |
| lcl|VRMN01000001.1_cds_KAA8497918.1_6871 | KAA8497918 | 60S ribosomal protein L13a | 0.17 | OrthoFinder |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003735 | structural constituent of ribosome | IEA | Interproscan |
| CC | GO:0005840 | ribosome | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0006412 | translation | IEP | Enrichment |
| BP | GO:0006518 | peptide metabolic process | IEP | Enrichment |
| BP | GO:0009059 | macromolecule biosynthetic process | IEP | Enrichment |
| BP | GO:0019538 | protein metabolic process | IEP | Enrichment |
| BP | GO:0034645 | cellular macromolecule biosynthetic process | IEP | Enrichment |
| BP | GO:0043043 | peptide biosynthetic process | IEP | Enrichment |
| BP | GO:0043603 | cellular amide metabolic process | IEP | Enrichment |
| BP | GO:0043604 | amide biosynthetic process | IEP | Enrichment |
| BP | GO:0044267 | cellular protein metabolic process | IEP | Enrichment |
| BP | GO:0044271 | cellular nitrogen compound biosynthetic process | IEP | Enrichment |
| BP | GO:1901564 | organonitrogen compound metabolic process | IEP | Enrichment |
| BP | GO:1901566 | organonitrogen compound biosynthetic process | IEP | Enrichment |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR005822 | Ribosomal_L13 | 13 | 100 |
| No external refs found! |