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  5. Cre12.g529400

Cre12.g529400 (30792485, RPS27e1)


Aliases : 30792485, RPS27e1

Description : Protein biosynthesis.cytosolic ribosome.small subunit (SSU).SSU proteome.RPS27 component


Gene families : OG_01_0000897 (OrthoFinder) Phylogenetic Tree(s): OG0000897_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre12.g529400
Cluster HCCA: Cluster_32

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00001299.2 tig00001299_g8061.t1 Protein biosynthesis.cytosolic ribosome.small subunit... 0.11 OrthoFinder
Dusal.0308s00024.1 33194639 Ribosomal protein S27e [Interproscan]. 0.11 OrthoFinder
EOD06206 No alias Ribosomal protein S27e [Interproscan]. 0.13 OrthoFinder
EOD35321 No alias Ribosomal protein S27e [Interproscan]. 0.13 OrthoFinder
OT_16G00070.1 No alias Ribosomal protein S27e [Interproscan]. 0.08 OrthoFinder
PTI_00G03050.1 No alias Ribosomal protein S27e [Interproscan]. 0.24 OrthoFinder
TP14G02220.1 No alias Ribosomal protein S27e [Interproscan]. 0.22 OrthoFinder
Vocar.0037s0078.1 32897515 Ribosomal protein S27e [Interproscan]. 0.17 OrthoFinder
XM_002502682.1 MICPUN_108364, 108364 Ribosomal protein S27e [Interproscan]. 0.25 OrthoFinder
lcl|BLLF01002835.1_cds_GFH25509.1_19986 HaLaN_23488, GFH25509 40S ribosomal protein S27 0.02 OrthoFinder
lcl|LHPG02000028.1_cds_PRW05814.1_5981 PRW05814 Plant intracellular Ras-group-related LRR 7 isoform B 0.13 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000123 histone acetyltransferase complex IEP Enrichment
CC GO:0005739 mitochondrion IEP Enrichment
CC GO:0005743 mitochondrial inner membrane IEP Enrichment
CC GO:0005750 mitochondrial respiratory chain complex III IEP Enrichment
CC GO:0019866 organelle inner membrane IEP Enrichment
CC GO:0031090 organelle membrane IEP Enrichment
CC GO:0031248 protein acetyltransferase complex IEP Enrichment
CC GO:0031966 mitochondrial membrane IEP Enrichment
CC GO:0045275 respiratory chain complex III IEP Enrichment
CC GO:0070069 cytochrome complex IEP Enrichment
CC GO:0098798 mitochondrial protein-containing complex IEP Enrichment
CC GO:0098800 inner mitochondrial membrane protein complex IEP Enrichment
CC GO:0098803 respiratory chain complex IEP Enrichment
CC GO:0140535 intracellular protein-containing complex IEP Enrichment
CC GO:1902493 acetyltransferase complex IEP Enrichment
CC GO:1902494 catalytic complex IEP Enrichment
InterPro domains Description Start Stop
IPR000592 Ribosomal_S27 30 84
No external refs found!