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Aliases : 30793001, RFC5
Description : Cell cycle.interphase.DNA replication.elongation.DNA-tracking platform.PCNA sliding clamp loader complex.RFC5 component
Gene families : OG_01_0002295 (OrthoFinder) Phylogenetic Tree(s): OG0002295_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Cre12.g527300 | |
| Cluster | HCCA: Cluster_47 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Cpa|evm.model.tig00001085.3 | tig00001085_g6944.t1 | RNA processing.RNA splicing.U2-type-intron-specific... | 0.01 | OrthoFinder | |
| Cz05g24170.t1 | No alias | ATPase, AAA-type, core; Replication factor C, C-terminal... | 0.1 | OrthoFinder | |
| EOD08878 | No alias | Putative replication factor C subunit 5 [Ensembl]. | 0.13 | OrthoFinder | |
| EOD10892 | No alias | ATPase, AAA-type, core [Interproscan]. | 0.09 | OrthoFinder | |
| OT_02G00560.1 | No alias | Replication factor C, C-terminal; ATPase, AAA-type, core... | 0.02 | OrthoFinder | |
| PTI_07G02450.1 | No alias | Replication factor C, C-terminal; ATPase, AAA-type, core... | 0.03 | OrthoFinder | |
| Sro793_g203250.1 | Contig534.g6933 | Factor C small subunit | 0.08 | OrthoFinder | |
| TP13G00440.1 | No alias | ATPase, AAA-type, core; Replication factor C, C-terminal... | 0.02 | OrthoFinder | |
| Transcript_contig_55649 | 55649 | Replication factor C, C-terminal; ATPase, AAA-type, core... | 0.03 | OrthoFinder | |
| Vocar.0037s0052.1 | 32897481 | ATPase, AAA-type, core; Replication factor C, C-terminal... | 0.06 | OrthoFinder | |
| XM_002504219.1 | MICPUN_107429, 107429 | Hypothetical protein (RFC5) | 0.1 | OrthoFinder | |
| XM_003060047.1 | MicpuC2_18318, 18318 | Replication factor C, C-terminal; ATPase, AAA-type, core... | 0.09 | OrthoFinder | |
| lcl|BLLF01000959.1_cds_GFH16198.1_10675 | HaLaN_12573, GFH16198 | AAA domain-containing protein | 0.02 | OrthoFinder | |
| lcl|BLLF01001681.1_cds_GFH20695.1_15172 | HaLaN_17859, GFH20695 | DNA replication factor C complex subunit 5 | 0.02 | OrthoFinder | |
| lcl|BLLF01004925.1_cds_GFH30464.1_24941 | HaLaN_29327, GFH30464 | DNA replication factor C complex subunit 5 | 0.02 | OrthoFinder | |
| lcl|VRMN01000001.1_cds_KAA8499312.1_8265 | KAA8499312 | Replication factor C subunit 5 | 0.07 | OrthoFinder |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000166 | nucleotide binding | IEP | Enrichment |
| CC | GO:0000808 | origin recognition complex | IEP | Enrichment |
| MF | GO:0003674 | molecular_function | IEP | Enrichment |
| MF | GO:0003676 | nucleic acid binding | IEP | Enrichment |
| MF | GO:0003677 | DNA binding | IEP | Enrichment |
| MF | GO:0003689 | DNA clamp loader activity | IEP | Enrichment |
| MF | GO:0003896 | DNA primase activity | IEP | Enrichment |
| MF | GO:0003899 | DNA-directed 5'-3' RNA polymerase activity | IEP | Enrichment |
| MF | GO:0003909 | DNA ligase activity | IEP | Enrichment |
| MF | GO:0003910 | DNA ligase (ATP) activity | IEP | Enrichment |
| MF | GO:0004748 | ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor | IEP | Enrichment |
| MF | GO:0005488 | binding | IEP | Enrichment |
| MF | GO:0005524 | ATP binding | IEP | Enrichment |
| CC | GO:0005634 | nucleus | IEP | Enrichment |
| CC | GO:0005663 | DNA replication factor C complex | IEP | Enrichment |
| BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | Enrichment |
| BP | GO:0006259 | DNA metabolic process | IEP | Enrichment |
| BP | GO:0006260 | DNA replication | IEP | Enrichment |
| BP | GO:0006270 | DNA replication initiation | IEP | Enrichment |
| BP | GO:0006275 | regulation of DNA replication | IEP | Enrichment |
| BP | GO:0006281 | DNA repair | IEP | Enrichment |
| BP | GO:0006298 | mismatch repair | IEP | Enrichment |
| BP | GO:0006310 | DNA recombination | IEP | Enrichment |
| BP | GO:0006401 | RNA catabolic process | IEP | Enrichment |
| BP | GO:0006950 | response to stress | IEP | Enrichment |
| BP | GO:0006974 | cellular response to DNA damage stimulus | IEP | Enrichment |
| BP | GO:0007062 | sister chromatid cohesion | IEP | Enrichment |
| BP | GO:0007064 | mitotic sister chromatid cohesion | IEP | Enrichment |
| BP | GO:0009059 | macromolecule biosynthetic process | IEP | Enrichment |
| BP | GO:0009987 | cellular process | IEP | Enrichment |
| MF | GO:0016725 | oxidoreductase activity, acting on CH or CH2 groups | IEP | Enrichment |
| MF | GO:0016728 | oxidoreductase activity, acting on CH or CH2 groups, disulfide as acceptor | IEP | Enrichment |
| MF | GO:0016886 | ligase activity, forming phosphoric ester bonds | IEP | Enrichment |
| MF | GO:0017076 | purine nucleotide binding | IEP | Enrichment |
| BP | GO:0019439 | aromatic compound catabolic process | IEP | Enrichment |
| BP | GO:0022402 | cell cycle process | IEP | Enrichment |
| MF | GO:0030554 | adenyl nucleotide binding | IEP | Enrichment |
| MF | GO:0030983 | mismatched DNA binding | IEP | Enrichment |
| MF | GO:0032553 | ribonucleotide binding | IEP | Enrichment |
| MF | GO:0032555 | purine ribonucleotide binding | IEP | Enrichment |
| MF | GO:0032559 | adenyl ribonucleotide binding | IEP | Enrichment |
| BP | GO:0033554 | cellular response to stress | IEP | Enrichment |
| BP | GO:0034645 | cellular macromolecule biosynthetic process | IEP | Enrichment |
| BP | GO:0034655 | nucleobase-containing compound catabolic process | IEP | Enrichment |
| MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | Enrichment |
| MF | GO:0036094 | small molecule binding | IEP | Enrichment |
| CC | GO:0042555 | MCM complex | IEP | Enrichment |
| MF | GO:0043167 | ion binding | IEP | Enrichment |
| MF | GO:0043168 | anion binding | IEP | Enrichment |
| BP | GO:0043170 | macromolecule metabolic process | IEP | Enrichment |
| CC | GO:0043226 | organelle | IEP | Enrichment |
| CC | GO:0043227 | membrane-bounded organelle | IEP | Enrichment |
| CC | GO:0043229 | intracellular organelle | IEP | Enrichment |
| CC | GO:0043231 | intracellular membrane-bounded organelle | IEP | Enrichment |
| BP | GO:0044260 | cellular macromolecule metabolic process | IEP | Enrichment |
| BP | GO:0044270 | cellular nitrogen compound catabolic process | IEP | Enrichment |
| BP | GO:0046700 | heterocycle catabolic process | IEP | Enrichment |
| BP | GO:0050896 | response to stimulus | IEP | Enrichment |
| BP | GO:0051716 | cellular response to stimulus | IEP | Enrichment |
| MF | GO:0061731 | ribonucleoside-diphosphate reductase activity | IEP | Enrichment |
| BP | GO:0090304 | nucleic acid metabolic process | IEP | Enrichment |
| MF | GO:0097159 | organic cyclic compound binding | IEP | Enrichment |
| MF | GO:0097367 | carbohydrate derivative binding | IEP | Enrichment |
| MF | GO:0140097 | catalytic activity, acting on DNA | IEP | Enrichment |
| MF | GO:1901265 | nucleoside phosphate binding | IEP | Enrichment |
| BP | GO:1901361 | organic cyclic compound catabolic process | IEP | Enrichment |
| MF | GO:1901363 | heterocyclic compound binding | IEP | Enrichment |
| BP | GO:1903047 | mitotic cell cycle process | IEP | Enrichment |
| No external refs found! |