Cre12.g520150 (30792869)

Aliases : 30792869

Description : Probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH4 OS=Arabidopsis thaliana

Gene families : OG_01_0000042 (OrthoFinder) Phylogenetic Tree(s): OG0000042_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Cre12.g520150
Cluster	HCCA: Cluster_132

Target	Alias	Description	ECC score	Gene Family Method
Cre03.g182950	30787736	RNA processing.RNA splicing.spliceosome...	0.03	OrthoFinder
Cz05g31260.t1	No alias	Helicase, C-terminal; Domain of unknown function...	0.02	OrthoFinder
XM_003057994.1	MicpuC2_57107, 57107	AAA+ ATPase domain; S1 domain [Interproscan].	0.03	OrthoFinder

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	IEA	Interproscan
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004386	helicase activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0008094	ATPase, acting on DNA	None	Extended
MF	GO:0016887	ATPase	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0140097	catalytic activity, acting on DNA	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR011709	DUF1605	722	807
IPR007502	Helicase-assoc_dom	437	557
IPR001650	Helicase_C	241	372
IPR011545	DEAD/DEAH_box_helicase_dom	22	197

External Links

No external refs found!