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  5. Cre12.g520000

Cre12.g520000 (30793330)


Aliases : 30793330

Description : Probable E3 ubiquitin-protein ligase XBOS31 OS=Oryza sativa subsp. japonica


Gene families : OG_01_0000281 (OrthoFinder) Phylogenetic Tree(s): OG0000281_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre12.g520000
Cluster HCCA: Cluster_143

Target Alias Description ECC score Gene Family Method Actions
Cz03g09120.t1 No alias Ankyrin repeats (many copies); Zinc finger, C3HC4 type... 0.02 OrthoFinder
Dusal.0364s00010.1 33192090 Zinc finger, C3HC4 type (RING finger); Ankyrin... 0.03 OrthoFinder
Vocar.0581s0001.1 32898770 Ankyrin repeat [Interproscan]. 0.03 OrthoFinder
lcl|BLLF01004296.1_cds_GFH29334.1_23811 HaLaN_27976, GFH29334 Hypothetical protein 0.01 OrthoFinder
lcl|LHPG02000014.1_cds_PRW39137.1_2634 PRW39137 Putative E3 ubiquitin-ligase XBOS32 0.01 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006355 regulation of transcription, DNA-templated IEP Enrichment
MF GO:0008270 zinc ion binding IEP Enrichment
BP GO:0009889 regulation of biosynthetic process IEP Enrichment
BP GO:0010468 regulation of gene expression IEP Enrichment
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Enrichment
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Enrichment
BP GO:0019222 regulation of metabolic process IEP Enrichment
BP GO:0031323 regulation of cellular metabolic process IEP Enrichment
BP GO:0031326 regulation of cellular biosynthetic process IEP Enrichment
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Enrichment
BP GO:0051252 regulation of RNA metabolic process IEP Enrichment
BP GO:0060255 regulation of macromolecule metabolic process IEP Enrichment
BP GO:0080090 regulation of primary metabolic process IEP Enrichment
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Enrichment
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Enrichment
BP GO:2001141 regulation of RNA biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR020683 Ankyrin_rpt-contain_dom 111 218
IPR002110 Ankyrin_rpt 235 256
No external refs found!