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  5. Cre12.g519700

Cre12.g519700 (30792298)


Aliases : 30792298

Description : GTP-binding protein At2g22870 OS=Arabidopsis thaliana


Gene families : OG_01_0000265 (OrthoFinder) Phylogenetic Tree(s): OG0000265_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre12.g519700
Cluster HCCA: Cluster_125

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000718.42 tig00000718_g3717.t1 GTP-binding protein At2g22870 OS=Arabidopsis thaliana 0.01 OrthoFinder
Cz01g30010.t1 No alias GTP binding domain [Interproscan]. 0.03 OrthoFinder
Dusal.0048s00043.1 33189485 GTP binding domain [Interproscan]. 0.02 OrthoFinder
OT_08G04220.1 No alias GTP binding domain [Interproscan]. 0.02 OrthoFinder
OT_10G00380.1 No alias GTP binding domain [Interproscan]. 0.01 OrthoFinder
PTI_06G04380.1 No alias GTP binding domain [Interproscan]. 0.02 OrthoFinder
Sro1330_g263390.1 Contig4401.g33058 GTP-binding protein EngB 0.02 OrthoFinder
TP03G08860.1 No alias GTP binding domain [Interproscan]. 0.02 OrthoFinder
TP15G02670.1 No alias GTP binding domain [Interproscan]. 0.01 OrthoFinder
Vocar.0037s0017.1 32897540 GTP binding domain [Interproscan]. 0.02 OrthoFinder
Vocar.0037s0134.1 32897632 GTP binding domain [Interproscan]. 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003723 RNA binding IEP Enrichment
BP GO:0006139 nucleobase-containing compound metabolic process IEP Enrichment
BP GO:0006396 RNA processing IEP Enrichment
BP GO:0006725 cellular aromatic compound metabolic process IEP Enrichment
BP GO:0006807 nitrogen compound metabolic process IEP Enrichment
BP GO:0008152 metabolic process IEP Enrichment
BP GO:0016070 RNA metabolic process IEP Enrichment
BP GO:0034641 cellular nitrogen compound metabolic process IEP Enrichment
BP GO:0043170 macromolecule metabolic process IEP Enrichment
BP GO:0044237 cellular metabolic process IEP Enrichment
BP GO:0044238 primary metabolic process IEP Enrichment
BP GO:0046483 heterocycle metabolic process IEP Enrichment
BP GO:0071704 organic substance metabolic process IEP Enrichment
BP GO:0090304 nucleic acid metabolic process IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
BP GO:1901360 organic cyclic compound metabolic process IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
InterPro domains Description Start Stop
IPR006073 GTP-bd 81 198
No external refs found!