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  5. Cre12.g514500

Cre12.g514500 (30792578, RPS11)


Aliases : 30792578, RPS11

Description : Protein biosynthesis.cytosolic ribosome.small subunit (SSU).SSU proteome.RPS11 component


Gene families : OG_01_0003480 (OrthoFinder) Phylogenetic Tree(s): OG0003480_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood HRR: Cre12.g514500
Cluster HCCA: Cluster_32

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000551.22 tig00000551_g2043.t1 Protein biosynthesis.cytosolic ribosome.small subunit... 0.25 OrthoFinder
Cz02g12020.t1 No alias Ribosomal protein S17/S11; 40S ribosomal protein S11,... 0.41 OrthoFinder
Dusal.0778s00006.1 33199653 Ribosomal protein S17/S11; 40S ribosomal protein S11,... 0.08 OrthoFinder
EOD05251 No alias Ribosomal protein S17/S11; 40S ribosomal protein S11,... 0.26 OrthoFinder
EOD19139 No alias Ribosomal protein S17/S11; 40S ribosomal protein S11,... 0.02 OrthoFinder
OT_06G01520.1 No alias 40S ribosomal protein S11, N-terminal; Ribosomal protein... 0.22 OrthoFinder
PTI_12G03740.1 No alias Ribosomal protein S17/S11; 40S ribosomal protein S11,... 0.3 OrthoFinder
Sro154_g070110.1 Contig2716.g21889 40S ribosomal protein S11 0.44 OrthoFinder
TP05G00420.1 No alias Ribosomal protein S17/S11; 40S ribosomal protein S11,... 0.36 OrthoFinder
Vocar.0006s0303.1 32893913 Ribosomal protein S17/S11; 40S ribosomal protein S11,... 0.06 OrthoFinder
XM_002501400.1 MICPUN_81184, 81184 Ribosomal protein 0.32 OrthoFinder
XM_003059434.1 MicpuC2_33883, 33883 Ribosomal protein S17/S11; 40S ribosomal protein S11,... 0.16 OrthoFinder
lcl|BLLF01005325.1_cds_GFH31049.1_25526 HaLaN_30009, GFH31049 Ribosomal_S17_N domain-containing protein 0.12 OrthoFinder
lcl|LHPG02000001.1_cds_PRW61173.1_440 PRW61173 40S ribosomal S11 0.24 OrthoFinder
lcl|VRMN01000015.1_cds_KAA8491213.1_5841 KAA8491213 40S ribosomal protein S11 0.16 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP Enrichment
BP GO:0006412 translation IEP Enrichment
BP GO:0006518 peptide metabolic process IEP Enrichment
BP GO:0006807 nitrogen compound metabolic process IEP Enrichment
BP GO:0009058 biosynthetic process IEP Enrichment
BP GO:0009059 macromolecule biosynthetic process IEP Enrichment
BP GO:0019538 protein metabolic process IEP Enrichment
MF GO:0019843 rRNA binding IEP Enrichment
BP GO:0034641 cellular nitrogen compound metabolic process IEP Enrichment
BP GO:0034645 cellular macromolecule biosynthetic process IEP Enrichment
BP GO:0043043 peptide biosynthetic process IEP Enrichment
BP GO:0043170 macromolecule metabolic process IEP Enrichment
BP GO:0043603 cellular amide metabolic process IEP Enrichment
BP GO:0043604 amide biosynthetic process IEP Enrichment
BP GO:0044249 cellular biosynthetic process IEP Enrichment
BP GO:0044260 cellular macromolecule metabolic process IEP Enrichment
BP GO:0044267 cellular protein metabolic process IEP Enrichment
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Enrichment
BP GO:1901564 organonitrogen compound metabolic process IEP Enrichment
BP GO:1901566 organonitrogen compound biosynthetic process IEP Enrichment
BP GO:1901576 organic substance biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR032440 Ribosomal_S11_N 4 71
IPR000266 Ribosomal_S17/S11 73 140
No external refs found!