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  5. Cre12.g514250

Cre12.g514250 (30792977)


Aliases : 30792977

Description : RNA biosynthesis.transcriptional activation.JUMONJI transcription factor


Gene families : OG_01_0000339 (OrthoFinder) Phylogenetic Tree(s): OG0000339_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre12.g514250
Cluster HCCA: Cluster_46

Target Alias Description ECC score Gene Family Method Actions
Cz01g27150.t1 No alias Zinc finger, C5HC2-type; JmjC domain; JmjN domain [Interproscan]. 0.02 OrthoFinder
Cz15g18170.t1 No alias JmjC domain; JmjN domain [Interproscan]. 0.04 OrthoFinder
OT_03G03430.1 No alias Zinc finger, C5HC2-type; JmjN domain; JmjC domain [Interproscan]. 0.03 OrthoFinder
Vocar.0021s0051.1 32895894 JmjC domain [Interproscan]. 0.02 OrthoFinder
lcl|BLLF01005550.1_cds_GFH31345.1_25822 HaLaN_30370, GFH31345 Jumonji domain-containing protein 0.01 OrthoFinder
lcl|VRMN01000015.1_cds_KAA8491227.1_5855 KAA8491227 Lysine-specific demethylase 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003747 translation release factor activity IEP Enrichment
MF GO:0004518 nuclease activity IEP Enrichment
MF GO:0004520 endodeoxyribonuclease activity IEP Enrichment
MF GO:0004531 deoxyribonuclease II activity IEP Enrichment
MF GO:0004536 deoxyribonuclease activity IEP Enrichment
MF GO:0004842 ubiquitin-protein transferase activity IEP Enrichment
BP GO:0006415 translational termination IEP Enrichment
BP GO:0006914 autophagy IEP Enrichment
MF GO:0008079 translation termination factor activity IEP Enrichment
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Enrichment
MF GO:0016889 endodeoxyribonuclease activity, producing 3'-phosphomonoesters IEP Enrichment
MF GO:0016894 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 3'-phosphomonoesters IEP Enrichment
MF GO:0019787 ubiquitin-like protein transferase activity IEP Enrichment
BP GO:0022411 cellular component disassembly IEP Enrichment
BP GO:0032984 protein-containing complex disassembly IEP Enrichment
BP GO:0043624 cellular protein complex disassembly IEP Enrichment
BP GO:0061919 process utilizing autophagic mechanism IEP Enrichment
InterPro domains Description Start Stop
IPR019787 Znf_PHD-finger 686 733
IPR004198 Znf_C5HC2 1158 1209
IPR003349 JmjN 9 42
IPR001606 ARID_dom 80 166
IPR003347 JmjC_dom 898 984
IPR013637 Lys_sp_deMease-like_dom 1558 1939
No external refs found!