Cre12.g509050 (30791680, PSBP3)

Aliases : 30791680, PSBP3

Description : Photosynthesis.photophosphorylation.photosystem II.assembly and maintenance.PPL1 protein

Gene families : OG_01_0004166 (OrthoFinder) Phylogenetic Tree(s): OG0004166_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type Description Actions
Neighborhood HRR: Cre12.g509050
Cluster HCCA: Cluster_10

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00001408.6 tig00001408_g8601.t1 No description available 0.03 OrthoFinder
Cz02g18040.t1 No alias PsbP, C-terminal [Interproscan]. 0.11 OrthoFinder
Dusal.0106s00009.1 33193493 PsbP, C-terminal [Interproscan]. 0.05 OrthoFinder
PTI_17G01030.1 No alias PsbP, C-terminal [Interproscan]. 0.05 OrthoFinder
Sro204_g085790.1 Contig1096.g10609 PsbP-like protein 0.03 OrthoFinder
Transcript_contig_59339 59339 PsbP, C-terminal [Interproscan]. 0.01 OrthoFinder
Vocar.0016s0221.1 32898000 PsbP, C-terminal [Interproscan]. 0.04 OrthoFinder
XM_002500052.1 MICPUN_107741, 107741 Thylakoid lumenal 25.6kDa protein like, chloroplast precursor 0.09 OrthoFinder
XM_003057786.1 MicpuC2_57449, 57449 PsbP, C-terminal [Interproscan]. 0.05 OrthoFinder
lcl|BLLF01000477.1_cds_GFH12203.1_6680 HaLaN_07842, GFH12203 Chloroplast oxygen-evolving complex/thylakoid lumenal... 0.04 OrthoFinder
lcl|LHPG02000012.1_cds_PRW44867.1_1794 PRW44867 PsbP chloroplastic 0.09 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEA Interproscan
CC GO:0009523 photosystem II IEA Interproscan
CC GO:0009654 photosystem II oxygen evolving complex IEA Interproscan
BP GO:0015979 photosynthesis IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0004618 phosphoglycerate kinase activity IEP Enrichment
MF GO:0004751 ribose-5-phosphate isomerase activity IEP Enrichment
MF GO:0004853 uroporphyrinogen decarboxylase activity IEP Enrichment
MF GO:0005261 cation channel activity IEP Enrichment
CC GO:0009522 photosystem I IEP Enrichment
CC GO:0009538 photosystem I reaction center IEP Enrichment
MF GO:0016491 oxidoreductase activity IEP Enrichment
MF GO:0016774 phosphotransferase activity, carboxyl group as acceptor IEP Enrichment
MF GO:0016829 lyase activity IEP Enrichment
MF GO:0016830 carbon-carbon lyase activity IEP Enrichment
MF GO:0016831 carboxy-lyase activity IEP Enrichment
MF GO:0016860 intramolecular oxidoreductase activity IEP Enrichment
MF GO:0016861 intramolecular oxidoreductase activity, interconverting aldoses and ketoses IEP Enrichment
InterPro domains Description Start Stop
IPR002683 PsbP_C 67 215
No external refs found!