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  5. Cre12.g507700

Cre12.g507700 (30791679)


Aliases : 30791679

Description : RNA processing.messenger ribonucleoprotein particle (mRNP).mRNP export.TREX/THO mRNP trafficking complex.THO subcomplex.THOC2/Tho2 component


Gene families : OG_01_0002802 (OrthoFinder) Phylogenetic Tree(s): OG0002802_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre12.g507700
Cluster HCCA: Cluster_57

Target Alias Description ECC score Gene Family Method Actions
Cz09g28220.t1 No alias THO complex, subunitTHOC2, C-terminal; THO complex... 0.02 OrthoFinder
Dusal.0033s00006.1 33202506 THO complex, subunitTHOC2, C-terminal; THO complex... 0.02 OrthoFinder
EOD20992 No alias THO complex, subunitTHOC2, N-terminal; THO complex,... 0.04 OrthoFinder
Sro19_g013450.1 Contig446.g6009 THO complex subunit 2 0.03 OrthoFinder
Vocar.0008s0450.1 32897257 THO complex, subunitTHOC2, N-terminal; THO complex,... 0.02 OrthoFinder
XM_002504522.1 MICPUN_107427, 107427 Hypothetical protein (THO2) 0.05 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Enrichment
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003723 RNA binding IEP Enrichment
MF GO:0005488 binding IEP Enrichment
BP GO:0006464 cellular protein modification process IEP Enrichment
BP GO:0006508 proteolysis IEP Enrichment
BP GO:0016579 protein deubiquitination IEP Enrichment
BP GO:0036211 protein modification process IEP Enrichment
BP GO:0043412 macromolecule modification IEP Enrichment
BP GO:0044267 cellular protein metabolic process IEP Enrichment
BP GO:0070646 protein modification by small protein removal IEP Enrichment
BP GO:0070647 protein modification by small protein conjugation or removal IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
InterPro domains Description Start Stop
IPR021726 THO_THOC2_N 688 762
IPR021418 THO_THOC2_C 1064 1187
IPR021418 THO_THOC2_C 1264 1444
IPR032302 THOC2_N 38 268
IPR032302 THOC2_N 498 668
No external refs found!