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  5. Cre12.g505500

Cre12.g505500 (30793498, HTR17)


Aliases : 30793498, HTR17

Description : Chromatin organisation.histones.H3-type histone


Gene families : OG_01_0000015 (OrthoFinder) Phylogenetic Tree(s): OG0000015_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre12.g505500

Target Alias Description ECC score Gene Family Method Actions
Cre06.g265500 30778907 Chromatin organisation.histones.H3-type histone 0.04 OrthoFinder
Cre16.g649900 30777869, HTR40 Chromatin organisation.histones.H3-type histone 0.02 OrthoFinder
Cre16.g650300 30777639, HTR39 Chromatin organisation.histones.H3-type histone 0.06 OrthoFinder
Cz05g04150.t1 No alias Histone H2A/H2B/H3 [Interproscan]. 0.07 OrthoFinder
Cz07g08150.t1 No alias Histone H2A/H2B/H3 [Interproscan]. 0.12 OrthoFinder
Cz08g27160.t1 No alias Histone H2A/H2B/H3 [Interproscan]. 0.07 OrthoFinder
Cz13g04210.t1 No alias Histone H2A/H2B/H3 [Interproscan]. 0.25 OrthoFinder
Cz18g11080.t1 No alias Histone H2A/H2B/H3 [Interproscan]. 0.1 OrthoFinder
Dusal.0002s00025.1 33187952 Histone H2A/H2B/H3 [Interproscan]. 0.02 OrthoFinder
Dusal.0073s00028.1 33194595 Histone H2A/H2B/H3 [Interproscan]. 0.03 OrthoFinder
Dusal.0093s00026.1 33185350 Histone H2A/H2B/H3 [Interproscan]. 0.08 OrthoFinder
Dusal.0093s00033.1 33185318 Histone H2A/H2B/H3 [Interproscan]. 0.15 OrthoFinder
Dusal.0152s00002.1 33186216 Histone H2A/H2B/H3 [Interproscan]. 0.03 OrthoFinder
Dusal.0152s00018.1 33186215 Histone H2A/H2B/H3 [Interproscan]. 0.05 OrthoFinder
Dusal.0165s00022.1 33193361 Histone H2A/H2B/H3 [Interproscan]. 0.06 OrthoFinder
Dusal.0194s00024.1 33199901 Histone H2A/H2B/H3 [Interproscan]. 0.06 OrthoFinder
Dusal.0322s00002.1 33197807 Histone H2A/H2B/H3 [Interproscan]. 0.08 OrthoFinder
Dusal.0482s00002.1 33186429 Histone H2A/H2B/H3 [Interproscan]. 0.05 OrthoFinder
Dusal.0658s00002.1 33202429 Histone H2A/H2B/H3 [Interproscan]. 0.06 OrthoFinder
Dusal.0806s00005.1 33190346 Histone H2A/H2B/H3 [Interproscan]. 0.06 OrthoFinder
Dusal.1067s00005.1 33188990 Histone H2A/H2B/H3 [Interproscan]. 0.18 OrthoFinder
Dusal.1079s00002.1 33193518 Histone H2A/H2B/H3 [Interproscan]. 0.17 OrthoFinder
EOD06916 No alias Putative histone H3 [Ensembl]. 0.03 OrthoFinder
EOD22942 No alias Putative histone H3 [Ensembl]. 0.12 OrthoFinder
EOD23663 No alias Putative histone H3 [Ensembl]. 0.03 OrthoFinder
EOD31711 No alias Histone H2A/H2B/H3 [Interproscan]. 0.12 OrthoFinder
EOD33509 No alias Histone H2A/H2B/H3 [Interproscan]. 0.12 OrthoFinder
EOD34125 No alias Histone H2A/H2B/H3 [Interproscan]. 0.06 OrthoFinder
OT_01G03920.1 No alias Histone H2A/H2B/H3 [Interproscan]. 0.01 OrthoFinder
OT_11G02230.1 No alias Histone H2A/H2B/H3 [Interproscan]. 0.12 OrthoFinder
PTI_06G03830.1 No alias Histone H2A/H2B/H3 [Interproscan]. 0.05 OrthoFinder
PTI_06G03900.1 No alias Histone H2A/H2B/H3 [Interproscan]. 0.06 OrthoFinder
Sro1642_g288060.1 Contig4503.g33764 Histone H3 0.04 OrthoFinder
Sro228_g092790.1 Contig1235.g11593 Histone H3 0.12 OrthoFinder
Sro2314_g322910.1 Contig3467.g26905 Histone H3 0.07 OrthoFinder
Sro348_g123190.1 Contig2346.g19285 Histone H3 0.03 OrthoFinder
Sro69_g038380.1 Contig4677.g34747 Histone H3 0.04 OrthoFinder
Sro6_g005390.1 Contig175.g2044 Histone H3 0.02 OrthoFinder
Sro749_g196770.1 Contig2460.g20134 Histone H3 0.02 OrthoFinder
Sro932_g221580.1 Contig2857.g22901 Histone H3 0.06 OrthoFinder
TP03G01210.1 No alias Histone H2A/H2B/H3 [Interproscan]. 0.01 OrthoFinder
Vocar.0002s0595.1 32891186 Histone H2A/H2B/H3 [Interproscan]. 0.03 OrthoFinder
Vocar.0006s0042.1 32894081 Histone H2A/H2B/H3 [Interproscan]. 0.03 OrthoFinder
Vocar.0006s0183.1 32894260 Histone H2A/H2B/H3 [Interproscan]. 0.07 OrthoFinder
Vocar.0027s0142.1 32887220 Histone H2A/H2B/H3 [Interproscan]. 0.04 OrthoFinder
Vocar.0027s0149.1 32887227 Histone H2A/H2B/H3 [Interproscan]. 0.02 OrthoFinder
Vocar.0028s0101.1 32895667 Histone H2A/H2B/H3 [Interproscan]. 0.04 OrthoFinder
Vocar.0028s0150.1 32895676 Histone H2A/H2B/H3 [Interproscan]. 0.08 OrthoFinder
Vocar.0042s0089.1 32892042 Histone H2A/H2B/H3 [Interproscan]. 0.02 OrthoFinder
XM_003059175.1 MicpuC2_27286, 27286 Histone H2A/H2B/H3 [Interproscan]. 0.07 OrthoFinder
XM_003061662.1 MicpuC2_48264, 48264 Histone H2A/H2B/H3 [Interproscan]. 0.04 OrthoFinder
XM_003061708.1 MicpuC2_48289, 48289 Histone H3 0.06 OrthoFinder
lcl|LHPG02000007.1_cds_PRW57380.1_9028 PRW57380 Histone H3 0.02 OrthoFinder
lcl|LHPG02000018.1_cds_PRW32917.1_3775 PRW32917 Histone H3 0.03 OrthoFinder
lcl|VRMN01000003.1_cds_KAA8495290.1_1288 KAA8495290 Histone H3 0.04 OrthoFinder
lcl|VRMN01000003.1_cds_KAA8495863.1_1861 KAA8495863 Histone H3 0.01 OrthoFinder

Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR007125 Histone_H2A/H2B/H3 1 131
No external refs found!