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  5. Cre12.g504200

Cre12.g504200 (30792072, RPS23)


Aliases : 30792072, RPS23

Description : Protein biosynthesis.cytosolic ribosome.small subunit (SSU).SSU proteome.RPS23 component


Gene families : OG_01_0004164 (OrthoFinder) Phylogenetic Tree(s): OG0004164_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre12.g504200
Cluster HCCA: Cluster_32

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00001264.27 tig00001264_g7883.t1 Protein biosynthesis.cytosolic ribosome.small subunit... 0.25 OrthoFinder
Cz02g32260.t1 No alias Ribosomal protein S12/S23 [Interproscan]. 0.34 OrthoFinder
Dusal.0029s00015.1 33203771 Ribosomal protein S12/S23 [Interproscan]. 0.2 OrthoFinder
EOD07302 No alias Ribosomal protein S12/S23 [Interproscan]. 0.2 OrthoFinder
EOD33195 No alias Ribosomal protein S12/S23 [Interproscan]. 0.2 OrthoFinder
OT_06G01850.1 No alias Ribosomal protein S12/S23 [Interproscan]. 0.09 OrthoFinder
PTI_02G00080.1 No alias Ribosomal protein S12/S23 [Interproscan]. 0.41 OrthoFinder
Sro922_g220630.1 Contig2958.g23506 40S ribosomal protein S23 0.43 OrthoFinder
SymbC1.scaffold7066.3 7066.3 Ribosomal protein S12/S23 [Interproscan]. 0.03 OrthoFinder
TP05G01460.1 No alias Ribosomal protein S12/S23 [Interproscan]. 0.33 OrthoFinder
XM_002499719.1 MICPUN_89912, 89912 Ribosomal protein S12/S23 [Interproscan]. 0.41 OrthoFinder
XM_003062101.1 MicpuC2_48397, 48397 Ribosomal protein S12/S23 [Interproscan]. 0.15 OrthoFinder
lcl|LHPG02000012.1_cds_PRW45112.1_1697 PRW45112 40S ribosomal S23 0.22 OrthoFinder
lcl|VRMN01000002.1_cds_KAA8497390.1_1119 KAA8497390 40S ribosomal protein S23 0.21 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP Enrichment
CC GO:0005739 mitochondrion IEP Enrichment
CC GO:0005743 mitochondrial inner membrane IEP Enrichment
CC GO:0005750 mitochondrial respiratory chain complex III IEP Enrichment
BP GO:0006412 translation IEP Enrichment
BP GO:0006518 peptide metabolic process IEP Enrichment
BP GO:0009059 macromolecule biosynthetic process IEP Enrichment
BP GO:0019538 protein metabolic process IEP Enrichment
MF GO:0019843 rRNA binding IEP Enrichment
CC GO:0019866 organelle inner membrane IEP Enrichment
CC GO:0031966 mitochondrial membrane IEP Enrichment
BP GO:0034645 cellular macromolecule biosynthetic process IEP Enrichment
BP GO:0043043 peptide biosynthetic process IEP Enrichment
BP GO:0043603 cellular amide metabolic process IEP Enrichment
BP GO:0043604 amide biosynthetic process IEP Enrichment
BP GO:0044249 cellular biosynthetic process IEP Enrichment
BP GO:0044260 cellular macromolecule metabolic process IEP Enrichment
BP GO:0044267 cellular protein metabolic process IEP Enrichment
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Enrichment
CC GO:0045275 respiratory chain complex III IEP Enrichment
CC GO:0070069 cytochrome complex IEP Enrichment
CC GO:0098798 mitochondrial protein-containing complex IEP Enrichment
CC GO:0098800 inner mitochondrial membrane protein complex IEP Enrichment
CC GO:0098803 respiratory chain complex IEP Enrichment
BP GO:1901566 organonitrogen compound biosynthetic process IEP Enrichment
BP GO:1901576 organic substance biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR006032 Ribosomal_S12/S23 31 141
No external refs found!