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  5. Cre12.g498450

Cre12.g498450 (30792845)


Aliases : 30792845

Description : Ultraviolet-B receptor UVR8 OS=Arabidopsis thaliana


Gene families : OG_01_0000020 (OrthoFinder) Phylogenetic Tree(s): OG0000020_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre12.g498450
Cluster HCCA: Cluster_126

Target Alias Description ECC score Gene Family Method Actions
Dusal.0193s00014.1 33196100 Regulator of chromosome condensation, RCC1 [Interproscan]. 0.03 OrthoFinder
EOD23616 No alias Regulator of chromosome condensation, RCC1 [Interproscan]. 0.04 OrthoFinder
EOD26777 No alias Regulator of chromosome condensation (RCC1) repeat;... 0.03 OrthoFinder
OT_03G05800.1 No alias Regulator of chromosome condensation, RCC1 [Interproscan]. 0.03 OrthoFinder
PTI_12G00160.1 No alias Regulator of chromosome condensation (RCC1) repeat;... 0.02 OrthoFinder
Sro443_g143990.1 Contig715.g8245 Ultraviolet-B receptor UVR8 0.01 OrthoFinder
Transcript_contig_2579 2579 Regulator of chromosome condensation, RCC1 [Interproscan]. 0.02 OrthoFinder
Transcript_contig_58480 58480 Regulator of chromosome condensation, RCC1 [Interproscan]. 0.02 OrthoFinder
XM_002506580.1 MICPUN_64626, 64626 Regulator of chromosome condensation, RCC1 [Interproscan]. 0.04 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Enrichment
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP Enrichment
MF GO:0003916 DNA topoisomerase activity IEP Enrichment
MF GO:0003917 DNA topoisomerase type I (single strand cut, ATP-independent) activity IEP Enrichment
MF GO:0005488 binding IEP Enrichment
MF GO:0005515 protein binding IEP Enrichment
CC GO:0005634 nucleus IEP Enrichment
BP GO:0006265 DNA topological change IEP Enrichment
MF GO:0034062 5'-3' RNA polymerase activity IEP Enrichment
MF GO:0043169 cation binding IEP Enrichment
CC GO:0043227 membrane-bounded organelle IEP Enrichment
CC GO:0043231 intracellular membrane-bounded organelle IEP Enrichment
MF GO:0046872 metal ion binding IEP Enrichment
BP GO:0051276 chromosome organization IEP Enrichment
BP GO:0071103 DNA conformation change IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
MF GO:0097747 RNA polymerase activity IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
InterPro domains Description Start Stop
IPR000408 Reg_chr_condens 158 219
IPR000408 Reg_chr_condens 101 153
IPR000408 Reg_chr_condens 348 398
IPR000408 Reg_chr_condens 281 344
No external refs found!