1. Home
  2. Species
  3. Chlamydomonas reinhardtii
  4. Sequence
  5. Cre12.g498250

Cre12.g498250 (30793608, RPS17)


Aliases : 30793608, RPS17

Description : Protein biosynthesis.cytosolic ribosome.small subunit (SSU).SSU proteome.RPS17 component


Gene families : OG_01_0002798 (OrthoFinder) Phylogenetic Tree(s): OG0002798_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre12.g498250
Cluster HCCA: Cluster_32

Target Alias Description ECC score Gene Family Method Actions
Cz02g24100.t1 No alias Ribosomal protein S17e [Interproscan]. 0.3 OrthoFinder
Dusal.0462s00007.1 33197488 Ribosomal protein S17e [Interproscan]. 0.11 OrthoFinder
EOD21818 No alias Ribosomal protein S17e [Interproscan]. 0.06 OrthoFinder
OT_04G05050.1 No alias Ribosomal protein S17e [Interproscan]. 0.23 OrthoFinder
PTI_05G01130.1 No alias Ribosomal protein S17e [Interproscan]. 0.25 OrthoFinder
Sro13_g009690.1 Contig337.g4510 40S ribosomal protein S17 0.48 OrthoFinder
SymbC1.scaffold3580.6 3580.6 Ribosomal protein S17e [Interproscan]. 0.04 OrthoFinder
SymbC1.scaffold3580.7 3580.7 Ribosomal protein S17e [Interproscan]. 0.1 OrthoFinder
TP16G00420.1 No alias Ribosomal protein S17e [Interproscan]. 0.36 OrthoFinder
Transcript_contig_80128 80128 Ribosomal protein S17e [Interproscan]. 0.05 OrthoFinder
Vocar.0006s0265.1 32893973 Ribosomal protein S17e [Interproscan]. 0.23 OrthoFinder
XM_002504075.1 MICPUN_76945, 76945 Ribosomal protein S17e [Interproscan]. 0.38 OrthoFinder
XM_003059599.1 MicpuC2_34073, 34073 Ribosomal protein S17e [Interproscan]. 0.17 OrthoFinder
lcl|BLLF01003084.1_cds_GFH26294.1_20771 HaLaN_24421, GFH26294 Ribosomal protein S17e [Interproscan]. 0.08 OrthoFinder
lcl|LHPG02000008.1_cds_PRW56597.1_9573 PRW56597 40S ribosomal S17 isoform A 0.26 OrthoFinder
lcl|VRMN01000015.1_cds_KAA8491192.1_5820 KAA8491192 40S ribosomal protein S17 0.16 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP Enrichment
CC GO:0005739 mitochondrion IEP Enrichment
BP GO:0006412 translation IEP Enrichment
BP GO:0006518 peptide metabolic process IEP Enrichment
BP GO:0009058 biosynthetic process IEP Enrichment
BP GO:0009059 macromolecule biosynthetic process IEP Enrichment
BP GO:0019538 protein metabolic process IEP Enrichment
MF GO:0019843 rRNA binding IEP Enrichment
BP GO:0034645 cellular macromolecule biosynthetic process IEP Enrichment
BP GO:0043043 peptide biosynthetic process IEP Enrichment
BP GO:0043603 cellular amide metabolic process IEP Enrichment
BP GO:0043604 amide biosynthetic process IEP Enrichment
BP GO:0044249 cellular biosynthetic process IEP Enrichment
BP GO:0044260 cellular macromolecule metabolic process IEP Enrichment
BP GO:0044267 cellular protein metabolic process IEP Enrichment
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Enrichment
BP GO:1901566 organonitrogen compound biosynthetic process IEP Enrichment
BP GO:1901576 organic substance biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR001210 Ribosomal_S17e 1 121
No external refs found!