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  5. Cre12.g494450

Cre12.g494450 (30791769, PRPS16)


Aliases : 30791769, PRPS16

Description : 30S ribosomal protein S16, chloroplastic OS=Staurastrum punctulatum


Gene families : OG_01_0001483 (OrthoFinder) Phylogenetic Tree(s): OG0001483_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre12.g494450
Cluster HCCA: Cluster_81

Target Alias Description ECC score Gene Family Method Actions
Cz04g32230.t1 No alias Ribosomal protein S16 [Interproscan]. 0.28 OrthoFinder
Dusal.0140s00006.1 33196367 Ribosomal protein S16 [Interproscan]. 0.07 OrthoFinder
OT_16G01850.1 No alias Ribosomal protein S16 [Interproscan]. 0.15 OrthoFinder
Sro133_g063150.1 Contig2274.g18874 Protein S16 0.03 OrthoFinder
Sro51_chlor_g029400.1 Rps16 Rps16 0.01 OrthoFinder
SymbC1.scaffold2820.1 2820.1 Ribosomal protein S16 [Interproscan]. 0.02 OrthoFinder
TPCG02150.1 No alias Ribosomal protein S16 [Interproscan]. 0.06 OrthoFinder
Vocar.0031s0013.1 32890135 Ribosomal protein S16 [Interproscan]. 0.11 OrthoFinder
XM_002501215.1 MICPUN_74175, 74175 Ribosomal protein S16 [Interproscan]. 0.01 OrthoFinder
XM_002506300.1 MICPUN_64421, 64421 Ribosomal protein S16 [Interproscan]. 0.21 OrthoFinder
XM_003063439.1 MicpuC2_48856, 48856 Ribosomal protein S16 [Interproscan]. 0.03 OrthoFinder
lcl|BLLF01000122.1_cds_GFH07884.1_2361 HaLaN_02753, GFH07884 Ribosomal protein S16 [Interproscan]. 0.05 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP Enrichment
MF GO:0003747 translation release factor activity IEP Enrichment
BP GO:0006066 alcohol metabolic process IEP Enrichment
BP GO:0006412 translation IEP Enrichment
BP GO:0006518 peptide metabolic process IEP Enrichment
BP GO:0006729 tetrahydrobiopterin biosynthetic process IEP Enrichment
MF GO:0008079 translation termination factor activity IEP Enrichment
MF GO:0008483 transaminase activity IEP Enrichment
MF GO:0009055 electron transfer activity IEP Enrichment
BP GO:0009058 biosynthetic process IEP Enrichment
BP GO:0009059 macromolecule biosynthetic process IEP Enrichment
MF GO:0016769 transferase activity, transferring nitrogenous groups IEP Enrichment
BP GO:0019538 protein metabolic process IEP Enrichment
BP GO:0019751 polyol metabolic process IEP Enrichment
MF GO:0019843 rRNA binding IEP Enrichment
BP GO:0034311 diol metabolic process IEP Enrichment
BP GO:0034312 diol biosynthetic process IEP Enrichment
BP GO:0034641 cellular nitrogen compound metabolic process IEP Enrichment
BP GO:0034645 cellular macromolecule biosynthetic process IEP Enrichment
BP GO:0042558 pteridine-containing compound metabolic process IEP Enrichment
BP GO:0042559 pteridine-containing compound biosynthetic process IEP Enrichment
BP GO:0043043 peptide biosynthetic process IEP Enrichment
BP GO:0043603 cellular amide metabolic process IEP Enrichment
BP GO:0043604 amide biosynthetic process IEP Enrichment
BP GO:0044249 cellular biosynthetic process IEP Enrichment
BP GO:0044260 cellular macromolecule metabolic process IEP Enrichment
BP GO:0044267 cellular protein metabolic process IEP Enrichment
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Enrichment
BP GO:0046146 tetrahydrobiopterin metabolic process IEP Enrichment
BP GO:0046165 alcohol biosynthetic process IEP Enrichment
BP GO:0046173 polyol biosynthetic process IEP Enrichment
BP GO:1901564 organonitrogen compound metabolic process IEP Enrichment
BP GO:1901566 organonitrogen compound biosynthetic process IEP Enrichment
BP GO:1901576 organic substance biosynthetic process IEP Enrichment
BP GO:1901615 organic hydroxy compound metabolic process IEP Enrichment
BP GO:1901617 organic hydroxy compound biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR000307 Ribosomal_S16 43 99
No external refs found!