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  5. Cre12.g491050

Cre12.g491050 (30792193, RIR2)


Aliases : 30792193, RIR2

Description : Nucleotide metabolism.deoxynucleotide metabolism.ribonucleoside-diphosphate reductase dimer.small subunit


Gene families : OG_01_0000968 (OrthoFinder) Phylogenetic Tree(s): OG0000968_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre12.g491050
Cluster HCCA: Cluster_47

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000383.42 tig00000383_g24654.t1 Nucleotide metabolism.deoxynucleotide... 0.02 OrthoFinder
Cz02g24230.t1 No alias Ribonucleotide reductase small subunit family [Interproscan]. 0.04 OrthoFinder
Dusal.0106s00020.1 33193472 Ribonucleotide reductase small subunit family [Interproscan]. 0.1 OrthoFinder
Dusal.0106s00021.1 33193497 Ribonucleotide reductase small subunit family [Interproscan]. 0.05 OrthoFinder
EOD10158 No alias Ribonucleotide reductase small subunit family [Interproscan]. 0.07 OrthoFinder
OT_08G00560.1 No alias Ribonucleotide reductase small subunit family [Interproscan]. 0.06 OrthoFinder
PTI_19G00790.1 No alias Ribonucleotide reductase small subunit family [Interproscan]. 0.05 OrthoFinder
Sro151_g069180.1 Contig294.g3844 Ribonucleoside-diphosphate reductase small chain 0.01 OrthoFinder
SymbC1.scaffold2286.5 2286.5 Alkyl hydroperoxide reductase subunit C/ Thiol specific... 0.02 OrthoFinder
SymbC1.scaffold4815.2 4815.2 Ribonucleotide reductase small subunit family [Interproscan]. 0.02 OrthoFinder
TP03G00660.1 No alias Ribonucleotide reductase small subunit family [Interproscan]. 0.03 OrthoFinder
TP10G02960.1 No alias Ribonucleotide reductase small subunit family [Interproscan]. 0.04 OrthoFinder
Transcript_contig_53975 53975 Ribonucleotide reductase small subunit family [Interproscan]. 0.04 OrthoFinder
Vocar.0031s0098.1 32890123 Ribonucleotide reductase small subunit family [Interproscan]. 0.08 OrthoFinder
XM_002503333.1 MICPUN_94589, 94589 Ribonucleotide reductase small subunit family [Interproscan]. 0.03 OrthoFinder
XM_003058319.1 MicpuC2_33344, 33344 Ribonucleotide reductase small subunit family [Interproscan]. 0.06 OrthoFinder
lcl|LHPG02000006.1_cds_PRW58060.1_8527 PRW58060 Ribonucleoside-diphosphate reductase small chain isoform A 0.04 OrthoFinder
lcl|VRMN01000001.1_cds_KAA8498304.1_7257 KAA8498304 Ribonucleoside-diphosphate reductase small chain 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Enrichment
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003677 DNA binding IEP Enrichment
MF GO:0004748 ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor IEP Enrichment
MF GO:0005488 binding IEP Enrichment
MF GO:0005524 ATP binding IEP Enrichment
BP GO:0006260 DNA replication IEP Enrichment
BP GO:0006275 regulation of DNA replication IEP Enrichment
BP GO:0006996 organelle organization IEP Enrichment
BP GO:0010564 regulation of cell cycle process IEP Enrichment
BP GO:0010639 negative regulation of organelle organization IEP Enrichment
BP GO:0010824 regulation of centrosome duplication IEP Enrichment
BP GO:0010826 negative regulation of centrosome duplication IEP Enrichment
BP GO:0010948 negative regulation of cell cycle process IEP Enrichment
MF GO:0016725 oxidoreductase activity, acting on CH or CH2 groups IEP Enrichment
MF GO:0016728 oxidoreductase activity, acting on CH or CH2 groups, disulfide as acceptor IEP Enrichment
MF GO:0017076 purine nucleotide binding IEP Enrichment
BP GO:0022607 cellular component assembly IEP Enrichment
BP GO:0030030 cell projection organization IEP Enrichment
BP GO:0030031 cell projection assembly IEP Enrichment
MF GO:0030554 adenyl nucleotide binding IEP Enrichment
MF GO:0032553 ribonucleotide binding IEP Enrichment
MF GO:0032555 purine ribonucleotide binding IEP Enrichment
MF GO:0032559 adenyl ribonucleotide binding IEP Enrichment
BP GO:0032886 regulation of microtubule-based process IEP Enrichment
BP GO:0033043 regulation of organelle organization IEP Enrichment
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Enrichment
CC GO:0036038 MKS complex IEP Enrichment
MF GO:0036094 small molecule binding IEP Enrichment
MF GO:0043167 ion binding IEP Enrichment
MF GO:0043168 anion binding IEP Enrichment
BP GO:0044782 cilium organization IEP Enrichment
BP GO:0045786 negative regulation of cell cycle IEP Enrichment
BP GO:0046605 regulation of centrosome cycle IEP Enrichment
BP GO:0046606 negative regulation of centrosome cycle IEP Enrichment
BP GO:0048519 negative regulation of biological process IEP Enrichment
BP GO:0048523 negative regulation of cellular process IEP Enrichment
BP GO:0050789 regulation of biological process IEP Enrichment
BP GO:0050794 regulation of cellular process IEP Enrichment
BP GO:0051128 regulation of cellular component organization IEP Enrichment
BP GO:0051129 negative regulation of cellular component organization IEP Enrichment
BP GO:0051493 regulation of cytoskeleton organization IEP Enrichment
BP GO:0051494 negative regulation of cytoskeleton organization IEP Enrichment
BP GO:0051726 regulation of cell cycle IEP Enrichment
BP GO:0060271 cilium assembly IEP Enrichment
MF GO:0061731 ribonucleoside-diphosphate reductase activity IEP Enrichment
BP GO:0065007 biological regulation IEP Enrichment
BP GO:0070925 organelle assembly IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
MF GO:0097367 carbohydrate derivative binding IEP Enrichment
BP GO:0120031 plasma membrane bounded cell projection assembly IEP Enrichment
BP GO:0120036 plasma membrane bounded cell projection organization IEP Enrichment
MF GO:1901265 nucleoside phosphate binding IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
InterPro domains Description Start Stop
IPR000358 RNR_small_fam 83 349
No external refs found!