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  5. Cre12.g490850

Cre12.g490850 (30791907)


Aliases : 30791907

Description : Protein translocation.nucleus.nucleocytoplasmic transport.karyopherin beta transport receptors.IMB4 import karyopherin


Gene families : OG_01_0000711 (OrthoFinder) Phylogenetic Tree(s): OG0000711_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre12.g490850
Cluster HCCA: Cluster_15

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000237.33 tig00000237_g20482.t1 Protein translocation.nucleus.nucleocytoplasmic... 0.02 OrthoFinder
Cpa|evm.model.tig00001030.13 tig00001030_g6453.t1 Protein translocation.nucleus.nucleocytoplasmic... 0.02 OrthoFinder
Cpa|evm.model.tig00001030.14 tig00001030_g6453.t1 No description available 0.03 OrthoFinder
Cz02g21420.t1 No alias HEAT repeats; Importin-beta, N-terminal domain [Interproscan]. 0.01 OrthoFinder
Dusal.0285s00009.1 33192896 HEAT-like repeat [Interproscan]. 0.02 OrthoFinder
EOD25312 No alias Importin-beta, N-terminal domain [Interproscan]. 0.01 OrthoFinder
EOD38465 No alias Importin-beta, N-terminal domain; Importin repeat 4;... 0.03 OrthoFinder
OT_13G02820.1 No alias HEAT-like repeat [Interproscan]. 0.03 OrthoFinder
OT_18G01010.1 No alias Importin repeat 4; HEAT repeats [Interproscan]. 0.04 OrthoFinder
Sro15_g011250.1 Contig791.g8851 Importin subunit beta-4 0.01 OrthoFinder
XM_002500637.1 MICPUN_80369, 80369 Importin repeat 4; HEAT repeats [Interproscan]. 0.03 OrthoFinder
lcl|VRMN01000001.1_cds_KAA8499564.1_8517 KAA8499564 Importin-5 0.02 OrthoFinder

Type GO Term Name Evidence Source
BP GO:0006886 intracellular protein transport IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000428 DNA-directed RNA polymerase complex IEP Enrichment
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0005488 binding IEP Enrichment
CC GO:0005666 RNA polymerase III complex IEP Enrichment
MF GO:0016782 transferase activity, transferring sulphur-containing groups IEP Enrichment
BP GO:0017038 protein import IEP Enrichment
MF GO:0017150 tRNA dihydrouridine synthase activity IEP Enrichment
CC GO:0019867 outer membrane IEP Enrichment
CC GO:0030880 RNA polymerase complex IEP Enrichment
MF GO:0035596 methylthiotransferase activity IEP Enrichment
MF GO:0050497 alkylthioltransferase activity IEP Enrichment
MF GO:0051539 4 iron, 4 sulfur cluster binding IEP Enrichment
CC GO:0055029 nuclear DNA-directed RNA polymerase complex IEP Enrichment
CC GO:0061695 transferase complex, transferring phosphorus-containing groups IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
CC GO:0140535 intracellular protein-containing complex IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
CC GO:1990234 transferase complex IEP Enrichment
InterPro domains Description Start Stop
IPR001494 Importin-beta_N 29 92
No external refs found!