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  5. Cre12.g490350

Cre12.g490350 (30792879, HDS1)


Aliases : 30792879, HDS1

Description : Secondary metabolism.terpenoids.methylerythritol phosphate pathway.4-hydroxy-3-methylbut-2-enyl diphosphate synthase


Gene families : OG_01_0001970 (OrthoFinder) Phylogenetic Tree(s): OG0001970_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre12.g490350
Cluster HCCA: Cluster_26

Target Alias Description ECC score Gene Family Method Actions
EOD30795 No alias 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase,... 0.07 OrthoFinder
OT_09G00940.1 No alias 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase,... 0.07 OrthoFinder
PTI_05G03380.1 No alias 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase,... 0.04 OrthoFinder
Sro162_g072810.1 Contig2670.g21617 Hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 0.03 OrthoFinder
TP08G03920.1 No alias 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase,... 0.04 OrthoFinder
Transcript_contig_54541 54541 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase,... 0.02 OrthoFinder
Vocar.0031s0090.1 32890075 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase,... 0.12 OrthoFinder
XM_002506190.1 MICPUN_95921, 95921 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase,... 0.07 OrthoFinder
XM_003056617.1 MicpuC2_45326, 45326 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase,... 0.02 OrthoFinder
lcl|BLLF01001748.1_cds_GFH21030.1_15507 HaLaN_18253, GFH21030 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase 0.02 OrthoFinder
lcl|BLLF01003714.1_cds_GFH28029.1_22506 HaLaN_26442, GFH28029 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase 0.01 OrthoFinder
lcl|BLLF01004560.1_cds_GFH29853.1_24330 HaLaN_28590, GFH29853 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase 0.03 OrthoFinder
lcl|LHPG02000012.1_cds_PRW44903.1_2058 PRW44903 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase... 0.05 OrthoFinder
lcl|VRMN01000001.1_cds_KAA8498959.1_7912 KAA8498959 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (ferredoxin) 0.02 OrthoFinder

Type GO Term Name Evidence Source
BP GO:0016114 terpenoid biosynthetic process IEA Interproscan
MF GO:0046429 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase activity IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000105 histidine biosynthetic process IEP Enrichment
MF GO:0000166 nucleotide binding IEP Enrichment
MF GO:0002161 aminoacyl-tRNA editing activity IEP Enrichment
MF GO:0003747 translation release factor activity IEP Enrichment
MF GO:0003855 3-dehydroquinate dehydratase activity IEP Enrichment
MF GO:0003879 ATP phosphoribosyltransferase activity IEP Enrichment
MF GO:0003924 GTPase activity IEP Enrichment
MF GO:0004107 chorismate synthase activity IEP Enrichment
MF GO:0004312 fatty acid synthase activity IEP Enrichment
MF GO:0004315 3-oxoacyl-[acyl-carrier-protein] synthase activity IEP Enrichment
MF GO:0004332 fructose-bisphosphate aldolase activity IEP Enrichment
MF GO:0004366 glycerol-3-phosphate O-acyltransferase activity IEP Enrichment
MF GO:0004764 shikimate 3-dehydrogenase (NADP+) activity IEP Enrichment
MF GO:0004812 aminoacyl-tRNA ligase activity IEP Enrichment
MF GO:0004820 glycine-tRNA ligase activity IEP Enrichment
MF GO:0004827 proline-tRNA ligase activity IEP Enrichment
MF GO:0004832 valine-tRNA ligase activity IEP Enrichment
MF GO:0004834 tryptophan synthase activity IEP Enrichment
MF GO:0004853 uroporphyrinogen decarboxylase activity IEP Enrichment
MF GO:0005488 binding IEP Enrichment
MF GO:0005524 ATP binding IEP Enrichment
CC GO:0005737 cytoplasm IEP Enrichment
BP GO:0006082 organic acid metabolic process IEP Enrichment
BP GO:0006139 nucleobase-containing compound metabolic process IEP Enrichment
BP GO:0006399 tRNA metabolic process IEP Enrichment
BP GO:0006415 translational termination IEP Enrichment
BP GO:0006418 tRNA aminoacylation for protein translation IEP Enrichment
BP GO:0006426 glycyl-tRNA aminoacylation IEP Enrichment
BP GO:0006438 valyl-tRNA aminoacylation IEP Enrichment
BP GO:0006520 cellular amino acid metabolic process IEP Enrichment
BP GO:0006547 histidine metabolic process IEP Enrichment
BP GO:0006725 cellular aromatic compound metabolic process IEP Enrichment
BP GO:0006807 nitrogen compound metabolic process IEP Enrichment
MF GO:0008079 translation termination factor activity IEP Enrichment
MF GO:0008374 O-acyltransferase activity IEP Enrichment
MF GO:0008661 1-deoxy-D-xylulose-5-phosphate synthase activity IEP Enrichment
BP GO:0016070 RNA metabolic process IEP Enrichment
MF GO:0016744 transketolase or transaldolase activity IEP Enrichment
MF GO:0016746 acyltransferase activity IEP Enrichment
MF GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups IEP Enrichment
MF GO:0016763 pentosyltransferase activity IEP Enrichment
MF GO:0016829 lyase activity IEP Enrichment
MF GO:0016830 carbon-carbon lyase activity IEP Enrichment
MF GO:0016832 aldehyde-lyase activity IEP Enrichment
MF GO:0016835 carbon-oxygen lyase activity IEP Enrichment
MF GO:0016836 hydro-lyase activity IEP Enrichment
MF GO:0016838 carbon-oxygen lyase activity, acting on phosphates IEP Enrichment
MF GO:0016874 ligase activity IEP Enrichment
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP Enrichment
MF GO:0016884 carbon-nitrogen ligase activity, with glutamine as amido-N-donor IEP Enrichment
BP GO:0017038 protein import IEP Enrichment
MF GO:0017076 purine nucleotide binding IEP Enrichment
BP GO:0019725 cellular homeostasis IEP Enrichment
BP GO:0019752 carboxylic acid metabolic process IEP Enrichment
BP GO:0022411 cellular component disassembly IEP Enrichment
MF GO:0030554 adenyl nucleotide binding IEP Enrichment
MF GO:0032553 ribonucleotide binding IEP Enrichment
MF GO:0032555 purine ribonucleotide binding IEP Enrichment
MF GO:0032559 adenyl ribonucleotide binding IEP Enrichment
BP GO:0032984 protein-containing complex disassembly IEP Enrichment
BP GO:0034641 cellular nitrogen compound metabolic process IEP Enrichment
BP GO:0034660 ncRNA metabolic process IEP Enrichment
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Enrichment
MF GO:0036094 small molecule binding IEP Enrichment
BP GO:0043038 amino acid activation IEP Enrichment
BP GO:0043039 tRNA aminoacylation IEP Enrichment
MF GO:0043167 ion binding IEP Enrichment
MF GO:0043168 anion binding IEP Enrichment
BP GO:0043170 macromolecule metabolic process IEP Enrichment
BP GO:0043436 oxoacid metabolic process IEP Enrichment
BP GO:0043624 cellular protein complex disassembly IEP Enrichment
BP GO:0044281 small molecule metabolic process IEP Enrichment
BP GO:0045454 cell redox homeostasis IEP Enrichment
BP GO:0046483 heterocycle metabolic process IEP Enrichment
MF GO:0050661 NADP binding IEP Enrichment
MF GO:0052689 carboxylic ester hydrolase activity IEP Enrichment
MF GO:0070402 NADPH binding IEP Enrichment
BP GO:0090304 nucleic acid metabolic process IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
MF GO:0097367 carbohydrate derivative binding IEP Enrichment
MF GO:0140098 catalytic activity, acting on RNA IEP Enrichment
MF GO:0140101 catalytic activity, acting on a tRNA IEP Enrichment
MF GO:1901265 nucleoside phosphate binding IEP Enrichment
BP GO:1901360 organic cyclic compound metabolic process IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
BP GO:1901564 organonitrogen compound metabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR004588 IspG_bac-typ 21 661
No external refs found!