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  5. Cre12.g489153

Cre12.g489153 (30793408)


Aliases : 30793408

Description : Protein biosynthesis.cytosolic ribosome.large subunit (LSU).LSU proteome component.RPL31 component


Gene families : OG_01_0003819 (OrthoFinder) Phylogenetic Tree(s): OG0003819_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood HRR: Cre12.g489153
Cluster HCCA: Cluster_32

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00020703.20 tig00020703_g13122.t1 Protein biosynthesis.cytosolic ribosome.large subunit... 0.33 OrthoFinder
Cz10g20060.t1 No alias Ribosomal protein L31e [Interproscan]. 0.28 OrthoFinder
Dusal.0029s00041.1 33203765 Ribosomal protein L31e [Interproscan]. 0.12 OrthoFinder
EOD14536 No alias Ribosomal protein L31e [Interproscan]. 0.19 OrthoFinder
EOD38942 No alias Ribosomal protein L31e [Interproscan]. 0.19 OrthoFinder
OT_10G01980.1 No alias Ribosomal protein L31e [Interproscan]. 0.2 OrthoFinder
PTI_07G02120.1 No alias Ribosomal protein L31e [Interproscan]. 0.22 OrthoFinder
Sro1684_g291000.1 Contig2811.g22545 60S ribosomal protein L31 0.46 OrthoFinder
TP02G04920.1 No alias Ribosomal protein L31e [Interproscan]. 0.46 OrthoFinder
Vocar.0016s0109.1 32897984 Ribosomal protein L31e [Interproscan]. 0.23 OrthoFinder
XM_002503445.1 MICPUN_91199, 91199 Ribosomal protein L31e [Interproscan]. 0.02 OrthoFinder
XM_003055597.1 MicpuC2_24390, 24390 Ribosomal protein L31e [Interproscan]. 0.13 OrthoFinder
lcl|BLLF01004002.1_cds_GFH28711.1_23188 HaLaN_27249, GFH28711 Ribosomal protein L31e [Interproscan]. 0.06 OrthoFinder
lcl|LHPG02000028.1_cds_PRW05819.1_6025 PRW05819 60S ribosomal L31 0.26 OrthoFinder
lcl|VRMN01000006.1_cds_KAA8493621.1_4383 KAA8493621 60S ribosomal protein L31 0.11 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP Enrichment
CC GO:0005743 mitochondrial inner membrane IEP Enrichment
CC GO:0005750 mitochondrial respiratory chain complex III IEP Enrichment
BP GO:0006412 translation IEP Enrichment
BP GO:0006518 peptide metabolic process IEP Enrichment
BP GO:0009059 macromolecule biosynthetic process IEP Enrichment
MF GO:0019843 rRNA binding IEP Enrichment
CC GO:0019866 organelle inner membrane IEP Enrichment
CC GO:0031966 mitochondrial membrane IEP Enrichment
BP GO:0034645 cellular macromolecule biosynthetic process IEP Enrichment
BP GO:0043043 peptide biosynthetic process IEP Enrichment
BP GO:0043603 cellular amide metabolic process IEP Enrichment
BP GO:0043604 amide biosynthetic process IEP Enrichment
CC GO:0045275 respiratory chain complex III IEP Enrichment
CC GO:0070069 cytochrome complex IEP Enrichment
CC GO:0098798 mitochondrial protein-containing complex IEP Enrichment
CC GO:0098800 inner mitochondrial membrane protein complex IEP Enrichment
CC GO:0098803 respiratory chain complex IEP Enrichment
BP GO:1901566 organonitrogen compound biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR000054 Ribosomal_L31e 57 138
No external refs found!