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  5. Cre12.g486900

Cre12.g486900 (30792022)


Aliases : 30792022

Description : RNA processing.RNA modification.dihydrouridylation.tRNA dihydrouridine synthase


Gene families : OG_01_0001153 (OrthoFinder) Phylogenetic Tree(s): OG0001153_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre12.g486900
Cluster HCCA: Cluster_15

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00001086.5 tig00001086_g6839.t1 RNA processing.RNA modification.dihydrouridylation.tRNA... 0.02 OrthoFinder
Cpa|evm.model.tig00001110.8 tig00001110_g7085.t1 RNA processing.RNA modification.dihydrouridylation.tRNA... 0.02 OrthoFinder
Cz10g20190.t1 No alias tRNA-dihydrouridine synthase [Interproscan]. 0.06 OrthoFinder
OT_08G01020.1 No alias tRNA-dihydrouridine synthase [Interproscan]. 0.02 OrthoFinder
Sro1286_g259400.1 Contig2537.g20699 Synthase 0.01 OrthoFinder
XM_002503300.1 MICPUN_82497, 82497 TRNA-dihydrouridine synthase 0.03 OrthoFinder

Type GO Term Name Evidence Source
BP GO:0008033 tRNA processing IEA Interproscan
MF GO:0017150 tRNA dihydrouridine synthase activity IEA Interproscan
MF GO:0050660 flavin adenine dinucleotide binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003743 translation initiation factor activity IEP Enrichment
MF GO:0005524 ATP binding IEP Enrichment
BP GO:0006413 translational initiation IEP Enrichment
BP GO:0006418 tRNA aminoacylation for protein translation IEP Enrichment
BP GO:0006996 organelle organization IEP Enrichment
MF GO:0008135 translation factor activity, RNA binding IEP Enrichment
MF GO:0015297 antiporter activity IEP Enrichment
MF GO:0015399 primary active transmembrane transporter activity IEP Enrichment
MF GO:0017076 purine nucleotide binding IEP Enrichment
BP GO:0022607 cellular component assembly IEP Enrichment
MF GO:0022804 active transmembrane transporter activity IEP Enrichment
MF GO:0030554 adenyl nucleotide binding IEP Enrichment
MF GO:0032553 ribonucleotide binding IEP Enrichment
MF GO:0032555 purine ribonucleotide binding IEP Enrichment
MF GO:0032559 adenyl ribonucleotide binding IEP Enrichment
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Enrichment
BP GO:0042255 ribosome assembly IEP Enrichment
BP GO:0042256 mature ribosome assembly IEP Enrichment
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP Enrichment
MF GO:0042910 xenobiotic transmembrane transporter activity IEP Enrichment
BP GO:0043038 amino acid activation IEP Enrichment
BP GO:0043039 tRNA aminoacylation IEP Enrichment
MF GO:0045182 translation regulator activity IEP Enrichment
BP GO:0055085 transmembrane transport IEP Enrichment
BP GO:0070925 organelle assembly IEP Enrichment
MF GO:0090079 translation regulator activity, nucleic acid binding IEP Enrichment
MF GO:0097367 carbohydrate derivative binding IEP Enrichment
InterPro domains Description Start Stop
IPR001269 DUS_fam 8 293
No external refs found!