Aliases : 30793052, RPC19
Description : RNA biosynthesis.DNA-dependent RNA polymerase (Pol) complexes.regulatory subunits.subunit 11
Gene families : OG_01_0000820 (OrthoFinder) Phylogenetic Tree(s): OG0000820_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Cre12.g484100 | |
Cluster | HCCA: Cluster_18 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Cpa|evm.model.tig00000403.66 | tig00000403_g325.t1 | RNA biosynthesis.DNA-dependent RNA polymerase (Pol)... | 0.04 | OrthoFinder | |
Cz05g13120.t1 | No alias | DNA-directed RNA polymerase, RBP11-like dimerisation... | 0.03 | OrthoFinder | |
EOD41842 | No alias | DNA-directed RNA polymerase, RBP11-like dimerisation... | 0.04 | OrthoFinder | |
OT_03G01090.1 | No alias | DNA-directed RNA polymerase, RBP11-like dimerisation... | 0.04 | OrthoFinder | |
Sro656_g182450.1 | Contig256.g3156 | I and III subunit RPAC2 | 0.02 | OrthoFinder | |
Vocar.0028s0097.1 | 32895532 | DNA-directed RNA polymerase, RBP11-like dimerisation... | 0.03 | OrthoFinder | |
XM_003062389.1 | MicpuC2_21450, 21450 | DNA-directed RNA polymerase, RBP11-like dimerisation... | 0.02 | OrthoFinder | |
lcl|LHPG02000001.1_cds_PRW61130.1_543 | PRW61130 | DNA-directed RNA polymerases IV and V subunit 11 | 0.04 | OrthoFinder |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0006351 | transcription, DNA-templated | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
CC | GO:0000178 | exosome (RNase complex) | IEP | Enrichment |
MF | GO:0000287 | magnesium ion binding | IEP | Enrichment |
MF | GO:0003676 | nucleic acid binding | IEP | Enrichment |
MF | GO:0003677 | DNA binding | IEP | Enrichment |
MF | GO:0003899 | DNA-directed 5'-3' RNA polymerase activity | IEP | Enrichment |
MF | GO:0005488 | binding | IEP | Enrichment |
BP | GO:0006364 | rRNA processing | IEP | Enrichment |
BP | GO:0006396 | RNA processing | IEP | Enrichment |
BP | GO:0006400 | tRNA modification | IEP | Enrichment |
BP | GO:0008033 | tRNA processing | IEP | Enrichment |
BP | GO:0016072 | rRNA metabolic process | IEP | Enrichment |
MF | GO:0016779 | nucleotidyltransferase activity | IEP | Enrichment |
CC | GO:0018995 | host cellular component | IEP | Enrichment |
CC | GO:0033643 | host cell part | IEP | Enrichment |
CC | GO:0033646 | host intracellular part | IEP | Enrichment |
CC | GO:0033647 | host intracellular organelle | IEP | Enrichment |
CC | GO:0033648 | host intracellular membrane-bounded organelle | IEP | Enrichment |
MF | GO:0034062 | 5'-3' RNA polymerase activity | IEP | Enrichment |
BP | GO:0034470 | ncRNA processing | IEP | Enrichment |
BP | GO:0034660 | ncRNA metabolic process | IEP | Enrichment |
CC | GO:0042025 | host cell nucleus | IEP | Enrichment |
MF | GO:0097159 | organic cyclic compound binding | IEP | Enrichment |
MF | GO:0097747 | RNA polymerase activity | IEP | Enrichment |
MF | GO:0140098 | catalytic activity, acting on RNA | IEP | Enrichment |
MF | GO:1901363 | heterocyclic compound binding | IEP | Enrichment |
CC | GO:1905354 | exoribonuclease complex | IEP | Enrichment |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR009025 | RBP11-like_dimer | 11 | 83 |
No external refs found! |