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  5. Cre11.g477850

Cre11.g477850 (30776004)


Aliases : 30776004

Description : RNA processing.messenger ribonucleoprotein particle (mRNP).stress granule.TSN ribonuclease


Gene families : OG_01_0002285 (OrthoFinder) Phylogenetic Tree(s): OG0002285_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre11.g477850
Cluster HCCA: Cluster_126

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00021357.70 tig00021357_g20794.t1 Ribonuclease TUDOR 1 OS=Arabidopsis thaliana 0.04 OrthoFinder
Cpa|evm.model.tig00021357.71 tig00021357_g20794.t1 RNA processing.messenger ribonucleoprotein particle... 0.04 OrthoFinder
XM_003060533.1 MicpuC2_27821, 27821 Staphylococcal nuclease (SNase-like), OB-fold; Tudor... 0.08 OrthoFinder
lcl|BLLF01000558.1_cds_GFH12963.1_7440 HaLaN_08752, GFH12963 Ribonuclease 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEP Enrichment
MF GO:0016462 pyrophosphatase activity IEP Enrichment
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Enrichment
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Enrichment
MF GO:0017111 nucleoside-triphosphatase activity IEP Enrichment
InterPro domains Description Start Stop
IPR016071 Staphylococal_nuclease_OB-fold 614 733
IPR016071 Staphylococal_nuclease_OB-fold 268 384
IPR016071 Staphylococal_nuclease_OB-fold 425 549
IPR016071 Staphylococal_nuclease_OB-fold 36 144
IPR002999 Tudor 801 918
No external refs found!