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  5. Cre11.g468450

Cre11.g468450 (30775984)


Aliases : 30775984

Description : RNA processing.messenger ribonucleoprotein particle (mRNP).mRNP export.TREX-2 mRNP trafficking complex.CEN centrin component


Gene families : OG_01_0000037 (OrthoFinder) Phylogenetic Tree(s): OG0000037_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre11.g468450
Cluster HCCA: Cluster_152

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00021435.47 tig00021435_g21427.t1 Calmodulin OS=Mougeotia scalaris 0.02 OrthoFinder
Cre06.g283550 30778549 Caltractin OS=Scherffelia dubia 0.04 OrthoFinder
Cz14g12250.t1 No alias EF-hand domain pair; EF-hand domain [Interproscan]. 0.02 OrthoFinder
Dusal.0080s00002.1 33203946 EF-hand domain [Interproscan]. 0.02 OrthoFinder
EOD20105 No alias Centrin-like protein [Ensembl]. 0.03 OrthoFinder
PTI_27G00410.1 No alias EF-hand domain [Interproscan]. 0.07 OrthoFinder
Sro1012_g231150.1 Contig304.g3985 Calmodulin-5/6/7/8 0.02 OrthoFinder
Sro2020_g311360.1 Contig280.g3625 Myosin light chain 1/3, skeletal muscle isoform 0.02 OrthoFinder
SymbC1.scaffold2037.3 2037.3 EF-hand domain; EF-hand domain pair [Interproscan]. 0.01 OrthoFinder
SymbC1.scaffold2133.1 2133.1 EF-hand domain; EF-hand domain pair [Interproscan]. 0.01 OrthoFinder
SymbC1.scaffold6405.5 6405.5 EF-hand domain [Interproscan]. 0.03 OrthoFinder
TP07G01960.1 No alias EF-hand domain [Interproscan]. 0.02 OrthoFinder
Transcript_contig_59375 59375 EF-hand domain pair; EF-hand domain [Interproscan]. 0.04 OrthoFinder
XM_002503574.1 MICPUN_60109, 60109 EF-hand domain [Interproscan]. 0.03 OrthoFinder
XM_002505526.1 MICPUN_77142, 77142 EF-hand domain [Interproscan]. 0.02 OrthoFinder
lcl|BLLF01000158.1_cds_GFH08389.1_2866 HaLaN_03340, GFH08389 EF-hand domain [Interproscan]. 0.02 OrthoFinder
lcl|VRMN01000003.1_cds_KAA8495639.1_1637 KAA8495639 Calmodulin 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0005813 centrosome IEP Enrichment
CC GO:0005815 microtubule organizing center IEP Enrichment
InterPro domains Description Start Stop
IPR002048 EF_hand_dom 28 90
IPR002048 EF_hand_dom 101 164
No external refs found!