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  5. Cre11.g468050

Cre11.g468050 (30776053)


Aliases : 30776053

Description : Photosynthesis.photophosphorylation.photosystem I.assembly and maintenance.VIPP protein


Gene families : OG_01_0001021 (OrthoFinder) Phylogenetic Tree(s): OG0001021_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre11.g468050
Cluster HCCA: Cluster_98

Target Alias Description ECC score Gene Family Method Actions
Cz18g13110.t1 No alias PspA/IM30 [Interproscan]. 0.02 OrthoFinder
TP02G08760.1 No alias PspA/IM30 [Interproscan]. 0.02 OrthoFinder
lcl|BLLF01000152.1_cds_GFH08301.1_2778 HaLaN_03241, GFH08301 PspA/IM30 [Interproscan]. 0.01 OrthoFinder
lcl|BLLF01000152.1_cds_GFH08302.1_2779 HaLaN_03243, GFH08302 PspA/IM30 [Interproscan]. 0.02 OrthoFinder
lcl|BLLF01002542.1_cds_GFH24459.1_18936 HaLaN_22261, GFH24459 PspA/IM30 [Interproscan]. 0.01 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000049 tRNA binding IEP Enrichment
BP GO:0000096 sulfur amino acid metabolic process IEP Enrichment
MF GO:0004518 nuclease activity IEP Enrichment
MF GO:0004527 exonuclease activity IEP Enrichment
CC GO:0005892 acetylcholine-gated channel complex IEP Enrichment
BP GO:0006289 nucleotide-excision repair IEP Enrichment
BP GO:0006520 cellular amino acid metabolic process IEP Enrichment
BP GO:0006534 cysteine metabolic process IEP Enrichment
MF GO:0008408 3'-5' exonuclease activity IEP Enrichment
BP GO:0009069 serine family amino acid metabolic process IEP Enrichment
BP GO:0009092 homoserine metabolic process IEP Enrichment
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Enrichment
BP GO:0019346 transsulfuration IEP Enrichment
MF GO:0030170 pyridoxal phosphate binding IEP Enrichment
CC GO:0034702 ion channel complex IEP Enrichment
CC GO:0043235 receptor complex IEP Enrichment
BP GO:0050667 homocysteine metabolic process IEP Enrichment
MF GO:0070279 vitamin B6 binding IEP Enrichment
CC GO:0098797 plasma membrane protein complex IEP Enrichment
CC GO:0098802 plasma membrane signaling receptor complex IEP Enrichment
CC GO:1902495 transmembrane transporter complex IEP Enrichment
CC GO:1990351 transporter complex IEP Enrichment
InterPro domains Description Start Stop
IPR007157 PspA_IM30 125 342
No external refs found!