1. Home
  2. Species
  3. Chlamydomonas reinhardtii
  4. Sequence
  5. Cre10.g461950

Cre10.g461950 (30789807)


Aliases : 30789807

Description : Protein degradation.26S proteasome.20S core protease.beta-type subunits.beta type-5 component


Gene families : OG_01_0002281 (OrthoFinder) Phylogenetic Tree(s): OG0002281_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre10.g461950
Cluster HCCA: Cluster_27

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00020554.44 tig00020554_g10827.t1 Protein degradation.26S proteasome.20S core... 0.17 OrthoFinder
Cz15g12180.t1 No alias Proteasome, subunit alpha/beta [Interproscan]. 0.09 OrthoFinder
Dusal.0461s00004.1 33202553 Proteasome, subunit alpha/beta [Interproscan]. 0.02 OrthoFinder
OT_15G00470.1 No alias Proteasome, subunit alpha/beta [Interproscan]. 0.02 OrthoFinder
PTI_07G02220.1 No alias Proteasome, subunit alpha/beta [Interproscan]. 0.33 OrthoFinder
Sro1101_g241430.1 Contig3867.g29745 Proteasome subunit pbs-5 0.39 OrthoFinder
TP05G04700.1 No alias Proteasome, subunit alpha/beta [Interproscan]. 0.24 OrthoFinder
Transcript_contig_55415 55415 Proteasome, subunit alpha/beta [Interproscan]. 0.03 OrthoFinder
Vocar.0029s0037.1 32887548 Proteasome, subunit alpha/beta [Interproscan]. 0.08 OrthoFinder
XM_002506771.1 MICPUN_96064, 96064 Proteasome, subunit alpha/beta [Interproscan]. 0.04 OrthoFinder
XM_003061006.1 MicpuC2_60944, 60944 Proteasome, subunit alpha/beta [Interproscan]. 0.08 OrthoFinder
lcl|LHPG02000009.1_cds_PRW56251.1_10324 PRW56251 20S proteasome beta subunit type beta 5 isoform B 0.06 OrthoFinder
lcl|VRMN01000003.1_cds_KAA8495411.1_1409 KAA8495411 Proteasome subunit beta type-5 0.04 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0004298 threonine-type endopeptidase activity IEA Interproscan
CC GO:0005839 proteasome core complex IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000151 ubiquitin ligase complex IEP Enrichment
CC GO:0000502 proteasome complex IEP Enrichment
MF GO:0003684 damaged DNA binding IEP Enrichment
BP GO:0006289 nucleotide-excision repair IEP Enrichment
BP GO:0006508 proteolysis IEP Enrichment
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP Enrichment
BP GO:0006807 nitrogen compound metabolic process IEP Enrichment
BP GO:0008152 metabolic process IEP Enrichment
MF GO:0008641 ubiquitin-like modifier activating enzyme activity IEP Enrichment
BP GO:0009056 catabolic process IEP Enrichment
BP GO:0009057 macromolecule catabolic process IEP Enrichment
BP GO:0009987 cellular process IEP Enrichment
BP GO:0016567 protein ubiquitination IEP Enrichment
MF GO:0016877 ligase activity, forming carbon-sulfur bonds IEP Enrichment
BP GO:0019538 protein metabolic process IEP Enrichment
CC GO:0019773 proteasome core complex, alpha-subunit complex IEP Enrichment
BP GO:0019941 modification-dependent protein catabolic process IEP Enrichment
MF GO:0030234 enzyme regulator activity IEP Enrichment
BP GO:0032446 protein modification by small protein conjugation IEP Enrichment
BP GO:0043170 macromolecule metabolic process IEP Enrichment
BP GO:0043632 modification-dependent macromolecule catabolic process IEP Enrichment
BP GO:0044237 cellular metabolic process IEP Enrichment
BP GO:0044238 primary metabolic process IEP Enrichment
BP GO:0044248 cellular catabolic process IEP Enrichment
BP GO:0044260 cellular macromolecule metabolic process IEP Enrichment
BP GO:0044265 cellular macromolecule catabolic process IEP Enrichment
BP GO:0051603 proteolysis involved in cellular protein catabolic process IEP Enrichment
BP GO:0071704 organic substance metabolic process IEP Enrichment
MF GO:0098772 molecular function regulator IEP Enrichment
CC GO:0140535 intracellular protein-containing complex IEP Enrichment
BP GO:1901564 organonitrogen compound metabolic process IEP Enrichment
BP GO:1901575 organic substance catabolic process IEP Enrichment
CC GO:1902494 catalytic complex IEP Enrichment
CC GO:1905368 peptidase complex IEP Enrichment
CC GO:1905369 endopeptidase complex IEP Enrichment
InterPro domains Description Start Stop
IPR001353 Proteasome_sua/b 58 238
No external refs found!