Cre10.g458550 (30790469)


Aliases : 30790469

Description : Protein translocation.chloroplast.thylakoid membrane SRP insertion system.STIC2 stromal sorting factor


Gene families : OG_01_0005855 (OrthoFinder) Phylogenetic Tree(s): OG0005855_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre10.g458550
Cluster HCCA: Cluster_10

Target Alias Description ECC score Gene Family Method Actions
Cz08g14210.t1 No alias Nucleoid-associated protein YbaB/EbfC family [Interproscan]. 0.02 OrthoFinder
Dusal.0052s00033.1 33199574 Nucleoid-associated protein YbaB/EbfC family [Interproscan]. 0.03 OrthoFinder
EOD34336 No alias Nucleoid-associated protein YbaB/EbfC family [Interproscan]. 0.03 OrthoFinder
Vocar.0020s0169.1 32886726 Nucleoid-associated protein YbaB/EbfC family [Interproscan]. 0.02 OrthoFinder
lcl|LHPG02000018.1_cds_PRW32988.1_3785 PRW32988 Nucleoid-associated chloroplastic 0.03 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003690 double-stranded DNA binding IEP Enrichment
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP Enrichment
MF GO:0005509 calcium ion binding IEP Enrichment
MF GO:0008113 peptide-methionine (S)-S-oxide reductase activity IEP Enrichment
BP GO:0009141 nucleoside triphosphate metabolic process IEP Enrichment
BP GO:0009143 nucleoside triphosphate catabolic process IEP Enrichment
CC GO:0009521 photosystem IEP Enrichment
CC GO:0009522 photosystem I IEP Enrichment
CC GO:0009523 photosystem II IEP Enrichment
CC GO:0009538 photosystem I reaction center IEP Enrichment
CC GO:0009654 photosystem II oxygen evolving complex IEP Enrichment
BP GO:0015979 photosynthesis IEP Enrichment
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP Enrichment
MF GO:0016671 oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor IEP Enrichment
MF GO:0016859 cis-trans isomerase activity IEP Enrichment
BP GO:0019439 aromatic compound catabolic process IEP Enrichment
CC GO:0032991 protein-containing complex IEP Enrichment
BP GO:0034404 nucleobase-containing small molecule biosynthetic process IEP Enrichment
BP GO:0034655 nucleobase-containing compound catabolic process IEP Enrichment
MF GO:0043169 cation binding IEP Enrichment
BP GO:0044270 cellular nitrogen compound catabolic process IEP Enrichment
BP GO:0046434 organophosphate catabolic process IEP Enrichment
BP GO:0046700 heterocycle catabolic process IEP Enrichment
MF GO:0046872 metal ion binding IEP Enrichment
CC GO:0098796 membrane protein complex IEP Enrichment
BP GO:1901292 nucleoside phosphate catabolic process IEP Enrichment
BP GO:1901361 organic cyclic compound catabolic process IEP Enrichment
CC GO:1902494 catalytic complex IEP Enrichment
CC GO:1990204 oxidoreductase complex IEP Enrichment
InterPro domains Description Start Stop
IPR004401 YbaB/EbfC 60 147
No external refs found!