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  5. Cre10.g452600

Cre10.g452600 (30790670)


Aliases : 30790670

No description available


Gene families : OG_01_0005850 (OrthoFinder) Phylogenetic Tree(s): OG0005850_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre10.g452600
Cluster HCCA: Cluster_15

Target Alias Description ECC score Gene Family Method Actions
Cz19g04030.t1 No alias rRNA-processing protein Efg1 [Interproscan]. 0.05 OrthoFinder
Dusal.0399s00010.1 33191737 rRNA-processing protein Efg1 [Interproscan]. 0.02 OrthoFinder
OT_07G02130.1 No alias rRNA-processing protein Efg1 [Interproscan]. 0.08 OrthoFinder
Transcript_contig_1572 1572 rRNA-processing protein Efg1 [Interproscan]. 0.05 OrthoFinder
Vocar.0004s0389.1 32889460 rRNA-processing protein Efg1 [Interproscan]. 0.05 OrthoFinder
XM_002499561.1 MICPUN_56097, 56097 rRNA-processing protein Efg1 [Interproscan]. 0.05 OrthoFinder
XM_003058171.1 MicpuC2_16457, 16457 rRNA-processing protein Efg1 [Interproscan]. 0.1 OrthoFinder
lcl|LHPG02000007.1_cds_PRW57271.1_9127 PRW57271 RRNA-processing EFG1 0.07 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0001510 RNA methylation IEP Enrichment
MF GO:0003674 molecular_function IEP Enrichment
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003723 RNA binding IEP Enrichment
MF GO:0003724 RNA helicase activity IEP Enrichment
MF GO:0005488 binding IEP Enrichment
MF GO:0005515 protein binding IEP Enrichment
CC GO:0005634 nucleus IEP Enrichment
CC GO:0005730 nucleolus IEP Enrichment
CC GO:0005732 sno(s)RNA-containing ribonucleoprotein complex IEP Enrichment
BP GO:0006139 nucleobase-containing compound metabolic process IEP Enrichment
BP GO:0006364 rRNA processing IEP Enrichment
BP GO:0006396 RNA processing IEP Enrichment
BP GO:0006725 cellular aromatic compound metabolic process IEP Enrichment
BP GO:0006807 nitrogen compound metabolic process IEP Enrichment
MF GO:0008134 transcription factor binding IEP Enrichment
MF GO:0008168 methyltransferase activity IEP Enrichment
BP GO:0016070 RNA metabolic process IEP Enrichment
BP GO:0016072 rRNA metabolic process IEP Enrichment
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Enrichment
BP GO:0030488 tRNA methylation IEP Enrichment
CC GO:0030684 preribosome IEP Enrichment
CC GO:0032040 small-subunit processome IEP Enrichment
BP GO:0032259 methylation IEP Enrichment
BP GO:0034470 ncRNA processing IEP Enrichment
BP GO:0034641 cellular nitrogen compound metabolic process IEP Enrichment
BP GO:0034660 ncRNA metabolic process IEP Enrichment
BP GO:0043170 macromolecule metabolic process IEP Enrichment
CC GO:0043226 organelle IEP Enrichment
CC GO:0043227 membrane-bounded organelle IEP Enrichment
CC GO:0043229 intracellular organelle IEP Enrichment
CC GO:0043231 intracellular membrane-bounded organelle IEP Enrichment
BP GO:0043414 macromolecule methylation IEP Enrichment
BP GO:0044237 cellular metabolic process IEP Enrichment
BP GO:0044238 primary metabolic process IEP Enrichment
BP GO:0046483 heterocycle metabolic process IEP Enrichment
BP GO:0071704 organic substance metabolic process IEP Enrichment
BP GO:0090304 nucleic acid metabolic process IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
BP GO:1901360 organic cyclic compound metabolic process IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
CC GO:1990904 ribonucleoprotein complex IEP Enrichment
InterPro domains Description Start Stop
IPR019310 Efg1 80 250
No external refs found!