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  5. Cre10.g452100

Cre10.g452100 (30790404, PSBY2)


Aliases : 30790404, PSBY2

Description : Photosynthesis.photophosphorylation.photosystem II.PS-II complex.component PsbY


Gene families : OG_01_0007013 (OrthoFinder) Phylogenetic Tree(s): OG0007013_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre10.g452100
Cluster HCCA: Cluster_66

Target Alias Description ECC score Gene Family Method Actions
Cz17g15140.t1 No alias Photosystem II PsbY [Interproscan]. 0.27 OrthoFinder
Dusal.0297s00019.1 33197363 Photosystem II PsbY [Interproscan]. 0.02 OrthoFinder
OT_12G00520.1 No alias Photosystem II PsbY [Interproscan]. 0.11 OrthoFinder
Transcript_contig_90904 90904 Hypothetical protein 0.02 OrthoFinder
Vocar.0028s0156.1 32895663 Hypothetical protein 0.14 OrthoFinder
XM_003060870.1 MicpuC2_63313, 63313 Photosystem II PsbY protein (PSBY) 0.09 OrthoFinder
lcl|LHPG02000013.1_cds_PRW44279.1_2431 PRW44279 Photosystem II 0.11 OrthoFinder

Type GO Term Name Evidence Source
CC GO:0009523 photosystem II IEA Interproscan
BP GO:0015979 photosynthesis IEA Interproscan
CC GO:0016021 integral component of membrane IEA Interproscan
MF GO:0030145 manganese ion binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP Enrichment
MF GO:0004109 coproporphyrinogen oxidase activity IEP Enrichment
MF GO:0004329 formate-tetrahydrofolate ligase activity IEP Enrichment
MF GO:0004618 phosphoglycerate kinase activity IEP Enrichment
MF GO:0004655 porphobilinogen synthase activity IEP Enrichment
MF GO:0004853 uroporphyrinogen decarboxylase activity IEP Enrichment
BP GO:0006778 porphyrin-containing compound metabolic process IEP Enrichment
BP GO:0006779 porphyrin-containing compound biosynthetic process IEP Enrichment
CC GO:0009522 photosystem I IEP Enrichment
CC GO:0009538 photosystem I reaction center IEP Enrichment
CC GO:0009654 photosystem II oxygen evolving complex IEP Enrichment
BP GO:0010207 photosystem II assembly IEP Enrichment
MF GO:0010242 oxygen evolving activity IEP Enrichment
MF GO:0016491 oxidoreductase activity IEP Enrichment
MF GO:0016634 oxidoreductase activity, acting on the CH-CH group of donors, oxygen as acceptor IEP Enrichment
MF GO:0016774 phosphotransferase activity, carboxyl group as acceptor IEP Enrichment
MF GO:0016829 lyase activity IEP Enrichment
BP GO:0018193 peptidyl-amino acid modification IEP Enrichment
BP GO:0018208 peptidyl-proline modification IEP Enrichment
BP GO:0033013 tetrapyrrole metabolic process IEP Enrichment
BP GO:0033014 tetrapyrrole biosynthetic process IEP Enrichment
BP GO:0034622 cellular protein-containing complex assembly IEP Enrichment
BP GO:0065003 protein-containing complex assembly IEP Enrichment
CC GO:1902494 catalytic complex IEP Enrichment
CC GO:1990204 oxidoreductase complex IEP Enrichment
InterPro domains Description Start Stop
IPR009388 PSII_PsbY 365 387
IPR009388 PSII_PsbY 152 183
IPR009388 PSII_PsbY 223 254
IPR009388 PSII_PsbY 294 325
No external refs found!