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  5. Cre10.g450550

Cre10.g450550 (30790419, PAO3)


Aliases : 30790419, PAO3

Description : Pheophorbide a oxygenase, chloroplastic OS=Arabidopsis thaliana


Gene families : OG_01_0000145 (OrthoFinder) Phylogenetic Tree(s): OG0000145_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre10.g450550
Cluster HCCA: Cluster_144

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000681.17 tig00000681_g3064.t1 Protein TIC 55, chloroplastic OS=Arabidopsis thaliana 0.03 OrthoFinder
OT_16G03010.1 No alias Rieske [2Fe-2S] iron-sulphur domain [Interproscan]. 0.02 OrthoFinder
Vocar.0008s0429.1 32897248 Rieske [2Fe-2S] iron-sulphur domain; Pheophorbide a... 0.05 OrthoFinder
Vocar.0015s0171.1 32899184 Rieske [2Fe-2S] iron-sulphur domain [Interproscan]. 0.04 OrthoFinder
Vocar.0020s0071.1 32886794 Rieske [2Fe-2S] iron-sulphur domain; Pheophorbide a... 0.03 OrthoFinder
XM_002499415.1 MICPUN_56398, 56398 Chloroplast envelope protein translocase family (TIC55-1) 0.03 OrthoFinder
XM_002503803.1 MICPUN_59870, 59870 Chloroplast envelope protein translocase family (TIC55-4) 0.02 OrthoFinder
XM_003055052.1 MicpuC2_50506, 50506 Chloroplast envelope protein translocase family (TIC55-6) 0.03 OrthoFinder
XM_003055699.1 MicpuC2_49408, 49408 Chloroplast envelope protein translocase family (TIC55-5) 0.04 OrthoFinder
XM_003058306.1 MicpuC2_33323, 33323 Chloroplast envelope protein translocase family (TIC55-3) 0.03 OrthoFinder
lcl|BLLF01000594.1_cds_GFH13284.1_7761 HaLaN_09136, GFH13284 Pheophorbide a oxygenase 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0010277 chlorophyllide a oxygenase [overall] activity IEA Interproscan
MF GO:0051537 2 iron, 2 sulfur cluster binding IEA Interproscan
BP GO:0055114 obsolete oxidation-reduction process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004527 exonuclease activity IEP Enrichment
MF GO:0008408 3'-5' exonuclease activity IEP Enrichment
CC GO:0009523 photosystem II IEP Enrichment
CC GO:0009654 photosystem II oxygen evolving complex IEP Enrichment
MF GO:0010181 FMN binding IEP Enrichment
BP GO:0015979 photosynthesis IEP Enrichment
CC GO:1990204 oxidoreductase complex IEP Enrichment
InterPro domains Description Start Stop
IPR017941 Rieske_2Fe-2S 93 178
IPR013626 PaO 321 404
No external refs found!