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  5. Cpa|evm.model.tig00000411.30

Cpa|evm.model.tig00000411.30 (tig00000411_g533.t1)


Aliases : tig00000411_g533.t1

Description : ATP-dependent Clp protease proteolytic subunit 6, chloroplastic OS=Arabidopsis thaliana


Gene families : OG_01_0000040 (OrthoFinder) Phylogenetic Tree(s): OG0000040_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00000411.30
Cluster HCCA: Cluster_91

Target Alias Description ECC score Gene Family Method Actions
Cre03.g204350 30787499, CLPR4 Protein degradation.peptidase families.serine-type... 0.02 OrthoFinder
Cre06.g299650 30779921, CLPR6 ATP-dependent Clp protease proteolytic subunit 6,... 0.02 OrthoFinder
Cre07.g331500 30774567, CLPR3 Protein degradation.peptidase families.serine-type... 0.02 OrthoFinder
Cz12g19140.t1 No alias Clp protease proteolytic subunit... 0.01 OrthoFinder
Dusal.0117s00022.1 33191095 Clp protease proteolytic subunit... 0.02 OrthoFinder
EOD08646 No alias Putative endopeptidase Clp [Ensembl]. 0.02 OrthoFinder
EOD35346 No alias Putative endopeptidase Clp [Ensembl]. 0.01 OrthoFinder
EOD36731 No alias Putative endopeptidase Clp [Ensembl]. 0.01 OrthoFinder
PTI_03G06500.1 No alias Clp protease proteolytic subunit... 0.02 OrthoFinder
PTI_26G01270.1 No alias Clp protease proteolytic subunit... 0.01 OrthoFinder
TP14G01640.1 No alias Clp protease proteolytic subunit... 0.01 OrthoFinder
lcl|BLLF01001574.1_cds_GFH20100.1_14577 HaLaN_17169, GFH20100 ATP-dependent Clp protease proteolytic subunit 0.01 OrthoFinder
lcl|VRMN01000001.1_cds_KAA8498034.1_6987 KAA8498034 ATP-dependent Clp protease proteolytic subunit 2 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP Enrichment
MF GO:0004222 metalloendopeptidase activity IEP Enrichment
MF GO:0004497 monooxygenase activity IEP Enrichment
MF GO:0004499 N,N-dimethylaniline monooxygenase activity IEP Enrichment
MF GO:0004842 ubiquitin-protein transferase activity IEP Enrichment
BP GO:0006352 DNA-templated transcription, initiation IEP Enrichment
BP GO:0006367 transcription initiation from RNA polymerase II promoter IEP Enrichment
MF GO:0008237 metallopeptidase activity IEP Enrichment
MF GO:0009055 electron transfer activity IEP Enrichment
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Enrichment
MF GO:0016709 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen IEP Enrichment
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Enrichment
MF GO:0016742 hydroxymethyl-, formyl- and related transferase activity IEP Enrichment
MF GO:0019787 ubiquitin-like protein transferase activity IEP Enrichment
BP GO:0032774 RNA biosynthetic process IEP Enrichment
MF GO:0050660 flavin adenine dinucleotide binding IEP Enrichment
MF GO:0050661 NADP binding IEP Enrichment
MF GO:0070402 NADPH binding IEP Enrichment
InterPro domains Description Start Stop
IPR023562 ClpP/TepA 38 98
IPR023562 ClpP/TepA 120 223
No external refs found!