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  5. Cre10.g442700

Cre10.g442700 (30789854)


Aliases : 30789854

Description : Chromatin organisation.chromatin remodeling complexes.RVB helicase component


Gene families : OG_01_0000819 (OrthoFinder) Phylogenetic Tree(s): OG0000819_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre10.g442700
Cluster HCCA: Cluster_110

Target Alias Description ECC score Gene Family Method Actions
Cz06g05110.t1 No alias TIP49, P-loop domain; RuvB-like, AAA-lid domain [Interproscan]. 0.05 OrthoFinder
Cz06g35240.t1 No alias TIP49, P-loop domain; RuvB-like, AAA-lid domain [Interproscan]. 0.05 OrthoFinder
PTI_04G05980.1 No alias TIP49, P-loop domain; RuvB-like, AAA-lid domain [Interproscan]. 0.04 OrthoFinder
SymbC1.scaffold1541.4 1541.4 TIP49, P-loop domain; RuvB-like, AAA-lid domain [Interproscan]. 0.03 OrthoFinder
Transcript_contig_67463 67463 TIP49, P-loop domain; RuvB-like, AAA-lid domain [Interproscan]. 0.01 OrthoFinder
Vocar.0046s0033.1 32892982 RuvB-like, AAA-lid domain; TIP49, P-loop domain [Interproscan]. 0.08 OrthoFinder
XM_002505536.1 MICPUN_98268, 98268 Rvb2-like protein 0.07 OrthoFinder
XM_003060424.1 MicpuC2_19130, 19130 Rvb1-like protein 0.02 OrthoFinder
XM_003063649.1 MicpuC2_44976, 44976 TIP49, P-loop domain; RuvB-like, AAA-lid domain [Interproscan]. 0.03 OrthoFinder
lcl|BLLF01000249.1_cds_GFH09635.1_4112 HaLaN_04814, GFH09635 RuvB-like helicase 0.04 OrthoFinder
lcl|BLLF01004324.1_cds_GFH29390.1_23867 HaLaN_28037, GFH29390 RuvB-like helicase 0.06 OrthoFinder
lcl|BLLF01004324.1_cds_GFH29391.1_23868 HaLaN_28038, GFH29391 RuvB-like helicase 0.05 OrthoFinder
lcl|VRMN01000001.1_cds_KAA8498499.1_7452 KAA8498499 RuvB-like 1 0.04 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003678 DNA helicase activity IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006631 fatty acid metabolic process IEP Enrichment
BP GO:0006633 fatty acid biosynthetic process IEP Enrichment
BP GO:0016053 organic acid biosynthetic process IEP Enrichment
BP GO:0032787 monocarboxylic acid metabolic process IEP Enrichment
BP GO:0044255 cellular lipid metabolic process IEP Enrichment
BP GO:0046394 carboxylic acid biosynthetic process IEP Enrichment
BP GO:0072330 monocarboxylic acid biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR041048 RuvB-like_C 369 434
IPR010339 TIP49_P-loop 20 363
No external refs found!