Cre10.g440050 (30790885)


Aliases : 30790885

Description : RNA processing.organelle machineries.ribonuclease activities.CSP41 endoribonuclease


Gene families : OG_01_0001072 (OrthoFinder) Phylogenetic Tree(s): OG0001072_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre10.g440050
Cluster HCCA: Cluster_60

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00021181.14 tig00021181_g19317.t1 RNA processing.organelle machineries.ribonuclease... 0.02 OrthoFinder
Cpa|evm.model.tig00021720.14 tig00021720_g23184.t1 RNA processing.organelle machineries.ribonuclease... 0.03 OrthoFinder
Cz06g03210.t1 No alias NAD-dependent epimerase/dehydratase [Interproscan]. 0.11 OrthoFinder
Cz06g11010.t1 No alias NAD(P)-binding domain [Interproscan]. 0.09 OrthoFinder
EOD15112 No alias NAD(P)-binding domain [Interproscan]. 0.02 OrthoFinder
EOD37816 No alias NAD(P)-binding domain [Interproscan]. 0.02 OrthoFinder
OT_15G00960.1 No alias NAD-dependent epimerase/dehydratase [Interproscan]. 0.05 OrthoFinder
PTI_01G10420.1 No alias NAD-dependent epimerase/dehydratase [Interproscan]. 0.06 OrthoFinder
Sro2140_g316190.1 Contig3280.g25801 NAD dependent epimerase/dehydratase family 0.03 OrthoFinder
SymbC1.scaffold1029.1 1029.1 Hypothetical protein 0.03 OrthoFinder
Vocar.0001s1288.1 32884505 NAD-dependent epimerase/dehydratase [Interproscan]. 0.03 OrthoFinder
XM_002502669.1 MICPUN_90903, 90903 NAD-dependent epimerase/dehydratase [Interproscan]. 0.07 OrthoFinder
XM_003064247.1 MicpuC2_54145, 54145 Hypothetical protein 0.07 OrthoFinder
lcl|BLLF01000502.1_cds_GFH12422.1_6899 HaLaN_08111, GFH12422 Epimerase domain-containing protein 0.06 OrthoFinder
lcl|BLLF01000502.1_cds_GFH12425.1_6902 HaLaN_08115, GFH12425 Epimerase domain-containing protein 0.02 OrthoFinder
lcl|LHPG02000001.1_cds_PRW61578.1_650 PRW61578 Chloroplast stem-loop binding of 41 kDa chloroplastic 0.06 OrthoFinder
lcl|LHPG02000003.1_cds_PRW59559.1_6547 PRW59559 Chloroplast stem-loop-binding 0.11 OrthoFinder
lcl|VRMN01000011.1_cds_KAA8491938.1_4946 KAA8491938 Chloroplast stem-loop binding protein of 41 kDa b, chloroplastic 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Enrichment
MF GO:0004332 fructose-bisphosphate aldolase activity IEP Enrichment
MF GO:0004618 phosphoglycerate kinase activity IEP Enrichment
BP GO:0006163 purine nucleotide metabolic process IEP Enrichment
BP GO:0006164 purine nucleotide biosynthetic process IEP Enrichment
BP GO:0006754 ATP biosynthetic process IEP Enrichment
BP GO:0006812 cation transport IEP Enrichment
BP GO:0008150 biological_process IEP Enrichment
BP GO:0008152 metabolic process IEP Enrichment
BP GO:0009141 nucleoside triphosphate metabolic process IEP Enrichment
BP GO:0009142 nucleoside triphosphate biosynthetic process IEP Enrichment
BP GO:0009144 purine nucleoside triphosphate metabolic process IEP Enrichment
BP GO:0009145 purine nucleoside triphosphate biosynthetic process IEP Enrichment
BP GO:0009150 purine ribonucleotide metabolic process IEP Enrichment
BP GO:0009152 purine ribonucleotide biosynthetic process IEP Enrichment
BP GO:0009165 nucleotide biosynthetic process IEP Enrichment
BP GO:0009199 ribonucleoside triphosphate metabolic process IEP Enrichment
BP GO:0009201 ribonucleoside triphosphate biosynthetic process IEP Enrichment
BP GO:0009205 purine ribonucleoside triphosphate metabolic process IEP Enrichment
BP GO:0009206 purine ribonucleoside triphosphate biosynthetic process IEP Enrichment
BP GO:0009259 ribonucleotide metabolic process IEP Enrichment
BP GO:0009260 ribonucleotide biosynthetic process IEP Enrichment
CC GO:0009512 cytochrome b6f complex IEP Enrichment
CC GO:0009521 photosystem IEP Enrichment
CC GO:0009523 photosystem II IEP Enrichment
CC GO:0009654 photosystem II oxygen evolving complex IEP Enrichment
BP GO:0015979 photosynthesis IEP Enrichment
BP GO:0015985 energy coupled proton transport, down electrochemical gradient IEP Enrichment
BP GO:0015986 ATP synthesis coupled proton transport IEP Enrichment
MF GO:0016491 oxidoreductase activity IEP Enrichment
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP Enrichment
MF GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEP Enrichment
MF GO:0016774 phosphotransferase activity, carboxyl group as acceptor IEP Enrichment
MF GO:0016832 aldehyde-lyase activity IEP Enrichment
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP Enrichment
BP GO:0017004 cytochrome complex assembly IEP Enrichment
BP GO:0019693 ribose phosphate metabolic process IEP Enrichment
MF GO:0030145 manganese ion binding IEP Enrichment
CC GO:0032991 protein-containing complex IEP Enrichment
CC GO:0033178 proton-transporting two-sector ATPase complex, catalytic domain IEP Enrichment
BP GO:0034220 ion transmembrane transport IEP Enrichment
BP GO:0034622 cellular protein-containing complex assembly IEP Enrichment
BP GO:0043933 protein-containing complex subunit organization IEP Enrichment
BP GO:0044237 cellular metabolic process IEP Enrichment
CC GO:0045261 proton-transporting ATP synthase complex, catalytic core F(1) IEP Enrichment
BP GO:0046034 ATP metabolic process IEP Enrichment
BP GO:0046390 ribose phosphate biosynthetic process IEP Enrichment
MF GO:0051537 2 iron, 2 sulfur cluster binding IEP Enrichment
BP GO:0055085 transmembrane transport IEP Enrichment
BP GO:0055114 obsolete oxidation-reduction process IEP Enrichment
BP GO:0065003 protein-containing complex assembly IEP Enrichment
CC GO:0070069 cytochrome complex IEP Enrichment
BP GO:0072521 purine-containing compound metabolic process IEP Enrichment
BP GO:0072522 purine-containing compound biosynthetic process IEP Enrichment
BP GO:0098655 cation transmembrane transport IEP Enrichment
BP GO:0098660 inorganic ion transmembrane transport IEP Enrichment
BP GO:0098662 inorganic cation transmembrane transport IEP Enrichment
CC GO:0098796 membrane protein complex IEP Enrichment
BP GO:1901135 carbohydrate derivative metabolic process IEP Enrichment
BP GO:1901137 carbohydrate derivative biosynthetic process IEP Enrichment
BP GO:1901293 nucleoside phosphate biosynthetic process IEP Enrichment
BP GO:1901564 organonitrogen compound metabolic process IEP Enrichment
BP GO:1901566 organonitrogen compound biosynthetic process IEP Enrichment
BP GO:1902600 proton transmembrane transport IEP Enrichment
InterPro domains Description Start Stop
IPR001509 Epimerase_deHydtase 41 249
No external refs found!