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Aliases : 30790715, RPT5
Description : Protein degradation.26S proteasome.regulatory particle.ATPase subunits.RPT5 regulatory component
Gene families : OG_01_0002509 (OrthoFinder) Phylogenetic Tree(s): OG0002509_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Cre10.g439150 | |
| Cluster | HCCA: Cluster_80 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Cpa|evm.model.tig00001187.20 | tig00001187_g7469.t1 | 26S proteasome regulatory subunit 6A homolog OS=Oryza... | 0.07 | OrthoFinder | |
| Cz06g04180.t1 | No alias | ATPase, AAA-type, core; Proteasomal ATPase OB C-terminal... | 0.11 | OrthoFinder | |
| EOD04234 | No alias | Proteasomal ATPase OB C-terminal domain; AAA ATPase,... | 0.07 | OrthoFinder | |
| OT_06G04090.1 | No alias | Proteasomal ATPase OB C-terminal domain; ATPase,... | 0.04 | OrthoFinder | |
| PTI_01G00490.1 | No alias | Proteasomal ATPase OB C-terminal domain; AAA ATPase,... | 0.15 | OrthoFinder | |
| Sro1266_g257580.1 | Contig2620.g21277 | 26S protease regulatory subunit 6A | 0.03 | OrthoFinder | |
| Sro536_g162160.1 | Contig299.g3946 | 26S protease regulatory subunit 6A | 0.19 | OrthoFinder | |
| TP06G02610.1 | No alias | Proteasomal ATPase OB C-terminal domain; ATPase,... | 0.11 | OrthoFinder | |
| Transcript_contig_55825 | 55825 | Proteasomal ATPase OB C-terminal domain; ATPase,... | 0.03 | OrthoFinder | |
| Vocar.0001s1300.1 | 32885813 | Proteasomal ATPase OB C-terminal domain; ATPase,... | 0.03 | OrthoFinder | |
| XM_002507809.1 | MICPUN_107027, 107027 | AAA ATPase, AAA+ lid domain; Proteasomal ATPase OB... | 0.05 | OrthoFinder | |
| XM_003062143.1 | MicpuC2_35637, 35637 | Proteasomal ATPase OB C-terminal domain; AAA ATPase,... | 0.05 | OrthoFinder | |
| lcl|BLLF01001710.1_cds_GFH20854.1_15331 | HaLaN_18048, GFH20854 | 26S protease regulatory subunit 6A | 0.02 | OrthoFinder | |
| lcl|BLLF01002897.1_cds_GFH25715.1_20192 | HaLaN_23722, GFH25715 | AAA domain-containing protein | 0.03 | OrthoFinder |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0000502 | proteasome complex | IEP | Enrichment |
| MF | GO:0003674 | molecular_function | IEP | Enrichment |
| MF | GO:0003779 | actin binding | IEP | Enrichment |
| MF | GO:0003899 | DNA-directed 5'-3' RNA polymerase activity | IEP | Enrichment |
| MF | GO:0004175 | endopeptidase activity | IEP | Enrichment |
| MF | GO:0004190 | aspartic-type endopeptidase activity | IEP | Enrichment |
| MF | GO:0004298 | threonine-type endopeptidase activity | IEP | Enrichment |
| MF | GO:0005515 | protein binding | IEP | Enrichment |
| CC | GO:0005575 | cellular_component | IEP | Enrichment |
| CC | GO:0005839 | proteasome core complex | IEP | Enrichment |
| BP | GO:0006457 | protein folding | IEP | Enrichment |
| BP | GO:0006508 | proteolysis | IEP | Enrichment |
| BP | GO:0006511 | ubiquitin-dependent protein catabolic process | IEP | Enrichment |
| BP | GO:0006606 | protein import into nucleus | IEP | Enrichment |
| BP | GO:0006810 | transport | IEP | Enrichment |
| BP | GO:0006886 | intracellular protein transport | IEP | Enrichment |
| BP | GO:0006904 | vesicle docking involved in exocytosis | IEP | Enrichment |
| BP | GO:0006913 | nucleocytoplasmic transport | IEP | Enrichment |
| MF | GO:0008092 | cytoskeletal protein binding | IEP | Enrichment |
| BP | GO:0008104 | protein localization | IEP | Enrichment |
| BP | GO:0008150 | biological_process | IEP | Enrichment |
| MF | GO:0008233 | peptidase activity | IEP | Enrichment |
| MF | GO:0008641 | ubiquitin-like modifier activating enzyme activity | IEP | Enrichment |
| BP | GO:0009056 | catabolic process | IEP | Enrichment |
| BP | GO:0009057 | macromolecule catabolic process | IEP | Enrichment |
| BP | GO:0009987 | cellular process | IEP | Enrichment |
| BP | GO:0015031 | protein transport | IEP | Enrichment |
| BP | GO:0016192 | vesicle-mediated transport | IEP | Enrichment |
| CC | GO:0016272 | prefoldin complex | IEP | Enrichment |
| MF | GO:0016787 | hydrolase activity | IEP | Enrichment |
| MF | GO:0016877 | ligase activity, forming carbon-sulfur bonds | IEP | Enrichment |
| BP | GO:0017038 | protein import | IEP | Enrichment |
| BP | GO:0019538 | protein metabolic process | IEP | Enrichment |
| BP | GO:0019941 | modification-dependent protein catabolic process | IEP | Enrichment |
| BP | GO:0022406 | membrane docking | IEP | Enrichment |
| CC | GO:0030117 | membrane coat | IEP | Enrichment |
| CC | GO:0030118 | clathrin coat | IEP | Enrichment |
| CC | GO:0030120 | vesicle coat | IEP | Enrichment |
| CC | GO:0030125 | clathrin vesicle coat | IEP | Enrichment |
| CC | GO:0030130 | clathrin coat of trans-Golgi network vesicle | IEP | Enrichment |
| MF | GO:0030234 | enzyme regulator activity | IEP | Enrichment |
| CC | GO:0032991 | protein-containing complex | IEP | Enrichment |
| BP | GO:0033036 | macromolecule localization | IEP | Enrichment |
| BP | GO:0033365 | protein localization to organelle | IEP | Enrichment |
| MF | GO:0034062 | 5'-3' RNA polymerase activity | IEP | Enrichment |
| BP | GO:0034504 | protein localization to nucleus | IEP | Enrichment |
| BP | GO:0034613 | cellular protein localization | IEP | Enrichment |
| BP | GO:0043170 | macromolecule metabolic process | IEP | Enrichment |
| BP | GO:0043632 | modification-dependent macromolecule catabolic process | IEP | Enrichment |
| BP | GO:0044248 | cellular catabolic process | IEP | Enrichment |
| BP | GO:0044260 | cellular macromolecule metabolic process | IEP | Enrichment |
| BP | GO:0044265 | cellular macromolecule catabolic process | IEP | Enrichment |
| BP | GO:0045184 | establishment of protein localization | IEP | Enrichment |
| BP | GO:0046907 | intracellular transport | IEP | Enrichment |
| BP | GO:0048278 | vesicle docking | IEP | Enrichment |
| BP | GO:0051169 | nuclear transport | IEP | Enrichment |
| BP | GO:0051170 | import into nucleus | IEP | Enrichment |
| BP | GO:0051179 | localization | IEP | Enrichment |
| BP | GO:0051234 | establishment of localization | IEP | Enrichment |
| BP | GO:0051603 | proteolysis involved in cellular protein catabolic process | IEP | Enrichment |
| BP | GO:0051640 | organelle localization | IEP | Enrichment |
| BP | GO:0051641 | cellular localization | IEP | Enrichment |
| BP | GO:0051649 | establishment of localization in cell | IEP | Enrichment |
| MF | GO:0070001 | aspartic-type peptidase activity | IEP | Enrichment |
| MF | GO:0070003 | threonine-type peptidase activity | IEP | Enrichment |
| BP | GO:0070727 | cellular macromolecule localization | IEP | Enrichment |
| BP | GO:0071702 | organic substance transport | IEP | Enrichment |
| BP | GO:0071705 | nitrogen compound transport | IEP | Enrichment |
| BP | GO:0072594 | establishment of protein localization to organelle | IEP | Enrichment |
| MF | GO:0097747 | RNA polymerase activity | IEP | Enrichment |
| MF | GO:0098772 | molecular function regulator | IEP | Enrichment |
| CC | GO:0098796 | membrane protein complex | IEP | Enrichment |
| BP | GO:0140029 | exocytic process | IEP | Enrichment |
| BP | GO:0140056 | organelle localization by membrane tethering | IEP | Enrichment |
| MF | GO:0140096 | catalytic activity, acting on a protein | IEP | Enrichment |
| CC | GO:0140535 | intracellular protein-containing complex | IEP | Enrichment |
| BP | GO:1901564 | organonitrogen compound metabolic process | IEP | Enrichment |
| BP | GO:1901575 | organic substance catabolic process | IEP | Enrichment |
| CC | GO:1905368 | peptidase complex | IEP | Enrichment |
| CC | GO:1905369 | endopeptidase complex | IEP | Enrichment |
| No external refs found! |