Cre10.g435500 (30790031, EFT2)

Aliases : 30790031, EFT2

Description : Protein biosynthesis.organelle translation machineries.translation elongation.EF-Ts elongation factor

Gene families : OG_01_0000919 (OrthoFinder) Phylogenetic Tree(s): OG0000919_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Cre10.g435500
Cluster	HCCA: Cluster_28

Target	Alias	Description	ECC score	Gene Family Method
Cpa\|evm.model.tig00000310.59	tig00000310_g23984.t1	Protein biosynthesis.organelle translation...	0.04	OrthoFinder
Cz02g30200.t1	No alias	S1 domain [Interproscan].	0.02	OrthoFinder
Cz06g36180.t1	No alias	Translation elongation factor EFTs/EF1B, dimerisation...	0.03	OrthoFinder
OT_04G00100.1	No alias	S1 domain; Translation elongation factor EFTs/EF1B,...	0.02	OrthoFinder
Sro135_g063790.1	Contig2231.g18524	Factor Ts	0.02	OrthoFinder
Sro205_g086090.1	Contig2217.g18422	Factor Ts	0.01	OrthoFinder
TP02G08520.1	No alias	Translation elongation factor EFTs/EF1B, dimerisation...	0.03	OrthoFinder
XM_002500955.1	MICPUN_80283, 80283	Translation elongation factor EFTs/EF1B, dimerisation...	0.06	OrthoFinder
lcl\|BLLF01000034.1_cds_GFH06339.1_816	HaLaN_00952, GFH06339	Elongation factor Ts	0.02	OrthoFinder

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003723	RNA binding	None	Extended
MF	GO:0003746	translation elongation factor activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0008135	translation factor activity, RNA binding	None	Extended
MF	GO:0045182	translation regulator activity	None	Extended
MF	GO:0090079	translation regulator activity, nucleic acid binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0003924	GTPase activity	IEP	Enrichment
MF	GO:0005525	GTP binding	IEP	Enrichment
BP	GO:0006778	porphyrin-containing compound metabolic process	IEP	Enrichment
BP	GO:0006779	porphyrin-containing compound biosynthetic process	IEP	Enrichment
BP	GO:0006783	heme biosynthetic process	IEP	Enrichment
BP	GO:0006784	heme A biosynthetic process	IEP	Enrichment
MF	GO:0016462	pyrophosphatase activity	IEP	Enrichment
MF	GO:0016627	oxidoreductase activity, acting on the CH-CH group of donors	IEP	Enrichment
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	IEP	Enrichment
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	IEP	Enrichment
MF	GO:0016853	isomerase activity	IEP	Enrichment
MF	GO:0016866	intramolecular transferase activity	IEP	Enrichment
MF	GO:0016868	intramolecular transferase activity, phosphotransferases	IEP	Enrichment
MF	GO:0017111	nucleoside-triphosphatase activity	IEP	Enrichment
MF	GO:0019001	guanyl nucleotide binding	IEP	Enrichment
MF	GO:0032561	guanyl ribonucleotide binding	IEP	Enrichment
BP	GO:0033013	tetrapyrrole metabolic process	IEP	Enrichment
BP	GO:0033014	tetrapyrrole biosynthetic process	IEP	Enrichment
BP	GO:0042168	heme metabolic process	IEP	Enrichment
BP	GO:0042440	pigment metabolic process	IEP	Enrichment
BP	GO:0046148	pigment biosynthetic process	IEP	Enrichment
BP	GO:0046160	heme a metabolic process	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR014039	Transl_elong_EFTs/EF1B_dimer	130	373

External Links

No external refs found!