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  5. Cre10.g433100

Cre10.g433100 (30789840)


Aliases : 30789840

Description : Probable GTP-binding protein OBGC1, chloroplastic OS=Oryza sativa subsp. indica


Gene families : OG_01_0000470 (OrthoFinder) Phylogenetic Tree(s): OG0000470_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre10.g433100
Cluster HCCA: Cluster_105

Target Alias Description ECC score Gene Family Method Actions
OT_07G04130.1 No alias GTP binding domain; GTP1/OBG domain [Interproscan]. 0.09 OrthoFinder
Transcript_contig_57944 57944 GTP binding domain; GTP1/OBG domain [Interproscan]. 0.02 OrthoFinder
Vocar.0008s0174.1 32897045 GTP binding domain; GTP1/OBG domain [Interproscan]. 0.04 OrthoFinder
XM_002499910.1 MICPUN_78980, 78980 GTP-binding protein OBG, C-terminal; GTP binding domain;... 0.11 OrthoFinder
lcl|VRMN01000009.1_cds_KAA8492612.1_9305 KAA8492612 GTPase Obg 0.03 OrthoFinder
lcl|VRMN01000011.1_cds_KAA8491832.1_4840 KAA8491832 GTPase Obg 0.06 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000428 DNA-directed RNA polymerase complex IEP Enrichment
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP Enrichment
MF GO:0004540 ribonuclease activity IEP Enrichment
CC GO:0005666 RNA polymerase III complex IEP Enrichment
BP GO:0006351 transcription, DNA-templated IEP Enrichment
BP GO:0006383 transcription by RNA polymerase III IEP Enrichment
MF GO:0008168 methyltransferase activity IEP Enrichment
BP GO:0009059 macromolecule biosynthetic process IEP Enrichment
BP GO:0016070 RNA metabolic process IEP Enrichment
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Enrichment
CC GO:0030880 RNA polymerase complex IEP Enrichment
BP GO:0032774 RNA biosynthetic process IEP Enrichment
MF GO:0034062 5'-3' RNA polymerase activity IEP Enrichment
BP GO:0034645 cellular macromolecule biosynthetic process IEP Enrichment
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP Enrichment
CC GO:0055029 nuclear DNA-directed RNA polymerase complex IEP Enrichment
CC GO:0061695 transferase complex, transferring phosphorus-containing groups IEP Enrichment
BP GO:0097659 nucleic acid-templated transcription IEP Enrichment
MF GO:0097747 RNA polymerase activity IEP Enrichment
MF GO:0140098 catalytic activity, acting on RNA IEP Enrichment
CC GO:0140513 nuclear protein-containing complex IEP Enrichment
CC GO:0140535 intracellular protein-containing complex IEP Enrichment
CC GO:1990234 transferase complex IEP Enrichment
InterPro domains Description Start Stop
IPR015349 OCT_dom 557 617
IPR006073 GTP-bd 342 460
IPR006169 GTP1_OBG_dom 182 338
No external refs found!