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  5. Cre10.g432800

Cre10.g432800 (30790737, RPSa)


Aliases : 30790737, RPSa

Description : Protein biosynthesis.cytosolic ribosome.small subunit (SSU).SSU proteome.RPSa component


Gene families : OG_01_0002089 (OrthoFinder) Phylogenetic Tree(s): OG0002089_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood HRR: Cre10.g432800
Cluster HCCA: Cluster_32

Target Alias Description ECC score Gene Family Method Actions
Cz04g36090.t1 No alias Ribosomal protein S2 [Interproscan]. 0.14 OrthoFinder
Dusal.0160s00027.1 33188334 Ribosomal protein S2 [Interproscan]. 0.16 OrthoFinder
EOD15394 No alias 40S ribosomal protein SA, C-terminal domain; Ribosomal... 0.1 OrthoFinder
OT_03G03280.1 No alias 40S ribosomal protein SA, C-terminal domain; Ribosomal... 0.06 OrthoFinder
PTI_12G01500.1 No alias Ribosomal protein S2 [Interproscan]. 0.12 OrthoFinder
Sro120_g058380.1 Contig2411.g19716 40S ribosomal protein SA 0.15 OrthoFinder
SymbC1.scaffold2216.1 2216.1 Ribosomal protein S2 [Interproscan]. 0.02 OrthoFinder
TP03G06220.1 No alias Ribosomal protein S2 [Interproscan]. 0.1 OrthoFinder
Transcript_contig_79177 79177 Ribosomal protein S2 [Interproscan]. 0.03 OrthoFinder
Vocar.0008s0458.1 32897164 Ribosomal protein S2 [Interproscan]. 0.11 OrthoFinder
XM_002499866.1 MICPUN_107814, 107814 Ribosomal protein S2; 40S ribosomal protein SA,... 0.07 OrthoFinder
XM_003055196.1 MicpuC2_13384, 13384 Ribosomal protein S2 [Interproscan]. 0.09 OrthoFinder
lcl|BLLF01000494.1_cds_GFH12355.1_6832 HaLaN_08023, GFH12355 40S ribosomal protein SA 0.05 OrthoFinder
lcl|VRMN01000001.1_cds_KAA8499119.1_8072 KAA8499119 40S ribosomal protein SA 0.12 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003723 RNA binding IEP Enrichment
MF GO:0005488 binding IEP Enrichment
MF GO:0005515 protein binding IEP Enrichment
BP GO:0006412 translation IEP Enrichment
BP GO:0006518 peptide metabolic process IEP Enrichment
BP GO:0006807 nitrogen compound metabolic process IEP Enrichment
BP GO:0009058 biosynthetic process IEP Enrichment
BP GO:0009059 macromolecule biosynthetic process IEP Enrichment
BP GO:0019538 protein metabolic process IEP Enrichment
BP GO:0034641 cellular nitrogen compound metabolic process IEP Enrichment
BP GO:0034645 cellular macromolecule biosynthetic process IEP Enrichment
BP GO:0043043 peptide biosynthetic process IEP Enrichment
BP GO:0043170 macromolecule metabolic process IEP Enrichment
BP GO:0043603 cellular amide metabolic process IEP Enrichment
BP GO:0043604 amide biosynthetic process IEP Enrichment
BP GO:0044237 cellular metabolic process IEP Enrichment
BP GO:0044238 primary metabolic process IEP Enrichment
BP GO:0044249 cellular biosynthetic process IEP Enrichment
BP GO:0044260 cellular macromolecule metabolic process IEP Enrichment
BP GO:0044267 cellular protein metabolic process IEP Enrichment
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Enrichment
BP GO:0071704 organic substance metabolic process IEP Enrichment
BP GO:1901564 organonitrogen compound metabolic process IEP Enrichment
BP GO:1901566 organonitrogen compound biosynthetic process IEP Enrichment
BP GO:1901576 organic substance biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR001865 Ribosomal_S2 107 179
No external refs found!