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  5. Cre10.g427150

Cre10.g427150 (30789885)


Aliases : 30789885

Description : RNA processing.RNA splicing.spliceosome-associated non-snRNP MOS4-associated complex (MAC).associated components.ISY1/MAC8 component


Gene families : OG_01_0002783 (OrthoFinder) Phylogenetic Tree(s): OG0002783_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre10.g427150
Cluster HCCA: Cluster_126

Target Alias Description ECC score Gene Family Method Actions
Cz01g20100.t1 No alias Pre-mRNA-splicing factor Isy1 [Interproscan]. 0.02 OrthoFinder
OT_04G03230.1 No alias Pre-mRNA-splicing factor Isy1 [Interproscan]. 0.03 OrthoFinder
PTI_05G00880.1 No alias Pre-mRNA-splicing factor Isy1 [Interproscan]. 0.01 OrthoFinder
TP07G01100.1 No alias Pre-mRNA-splicing factor Isy1 [Interproscan]. 0.02 OrthoFinder
Transcript_contig_58335 58335 Pre-mRNA-splicing factor Isy1 [Interproscan]. 0.01 OrthoFinder
XM_002504831.1 MICPUN_95428, 95428 Pre-mRNA-splicing factor Isy1 [Interproscan]. 0.04 OrthoFinder
XM_003060680.1 MicpuC2_34682, 34682 Pre-mRNA-splicing factor Isy1 [Interproscan]. 0.03 OrthoFinder
lcl|LHPG02000007.1_cds_PRW56898.1_8796 PRW56898 U5 small nuclear ribonucleo 40 kDa 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP Enrichment
MF GO:0003674 molecular_function IEP Enrichment
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003729 mRNA binding IEP Enrichment
MF GO:0005488 binding IEP Enrichment
MF GO:0005515 protein binding IEP Enrichment
CC GO:0005634 nucleus IEP Enrichment
CC GO:0005849 mRNA cleavage factor complex IEP Enrichment
BP GO:0006352 DNA-templated transcription, initiation IEP Enrichment
MF GO:0008641 ubiquitin-like modifier activating enzyme activity IEP Enrichment
BP GO:0009059 macromolecule biosynthetic process IEP Enrichment
CC GO:0016272 prefoldin complex IEP Enrichment
MF GO:0016877 ligase activity, forming carbon-sulfur bonds IEP Enrichment
BP GO:0018193 peptidyl-amino acid modification IEP Enrichment
BP GO:0018208 peptidyl-proline modification IEP Enrichment
MF GO:0019781 NEDD8 activating enzyme activity IEP Enrichment
BP GO:0032774 RNA biosynthetic process IEP Enrichment
CC GO:0043226 organelle IEP Enrichment
CC GO:0043227 membrane-bounded organelle IEP Enrichment
CC GO:0043229 intracellular organelle IEP Enrichment
CC GO:0043231 intracellular membrane-bounded organelle IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
InterPro domains Description Start Stop
IPR009360 Isy1 1 256
No external refs found!