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  5. Cre10.g423650

Cre10.g423650 (30790265, PRPL11)


Aliases : 30790265, PRPL11

Description : Protein biosynthesis.organelle translation machineries.plastidial ribosome.large subunit proteome.psRPL11 component


Gene families : OG_01_0001071 (OrthoFinder) Phylogenetic Tree(s): OG0001071_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre10.g423650
Cluster HCCA: Cluster_81

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000361.54 tig00000361_g24402.t1 Protein biosynthesis.organelle translation... 0.04 OrthoFinder
Cz11g03060.t1 No alias Ribosomal protein L11, C-terminal; Ribosomal protein... 0.13 OrthoFinder
EOD25013 No alias Ribosomal protein L11, C-terminal; Ribosomal protein... 0.07 OrthoFinder
EOD40511 No alias 50S ribosomal protein L11 [Ensembl]. 0.07 OrthoFinder
OT_02G05180.1 No alias Ribosomal protein L11, N-terminal; Ribosomal protein... 0.02 OrthoFinder
OT_14G01140.1 No alias Ribosomal protein L11, N-terminal; Ribosomal protein... 0.21 OrthoFinder
Sro10_g007800.1 Contig1.g4 50S ribosomal protein L11 0.02 OrthoFinder
Sro51_chlor_g030320.1 Rpl11 Rpl11 0.1 OrthoFinder
TPCG00670.1 No alias Ribosomal protein L11, C-terminal; Ribosomal protein... 0.07 OrthoFinder
Vocar.0030s0022.1 32894461 Ribosomal protein L11, C-terminal; Ribosomal protein... 0.14 OrthoFinder
XM_002505743.1 MICPUN_92304, 92304 Ribosomal protein L11, N-terminal; Ribosomal protein... 0.24 OrthoFinder
XM_003063782.1 MicpuC2_29915, 29915 Ribosomal protein L11, N-terminal; Ribosomal protein... 0.08 OrthoFinder
lcl|BLLF01005196.1_cds_GFH30861.1_25338 HaLaN_29790, GFH30861 50S ribosomal protein L11 0.1 OrthoFinder
lcl|LHPG02000017.1_cds_PRW33322.1_3528 PRW33322 50S ribosomal L11 0.19 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000049 tRNA binding IEP Enrichment
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003723 RNA binding IEP Enrichment
MF GO:0003746 translation elongation factor activity IEP Enrichment
MF GO:0003747 translation release factor activity IEP Enrichment
MF GO:0004455 ketol-acid reductoisomerase activity IEP Enrichment
BP GO:0006066 alcohol metabolic process IEP Enrichment
BP GO:0006412 translation IEP Enrichment
BP GO:0006414 translational elongation IEP Enrichment
BP GO:0006457 protein folding IEP Enrichment
BP GO:0006518 peptide metabolic process IEP Enrichment
BP GO:0006729 tetrahydrobiopterin biosynthetic process IEP Enrichment
BP GO:0006807 nitrogen compound metabolic process IEP Enrichment
MF GO:0008079 translation termination factor activity IEP Enrichment
MF GO:0008135 translation factor activity, RNA binding IEP Enrichment
BP GO:0008150 biological_process IEP Enrichment
BP GO:0008152 metabolic process IEP Enrichment
MF GO:0009055 electron transfer activity IEP Enrichment
BP GO:0009058 biosynthetic process IEP Enrichment
BP GO:0009059 macromolecule biosynthetic process IEP Enrichment
BP GO:0009081 branched-chain amino acid metabolic process IEP Enrichment
BP GO:0009082 branched-chain amino acid biosynthetic process IEP Enrichment
BP GO:0009987 cellular process IEP Enrichment
MF GO:0016491 oxidoreductase activity IEP Enrichment
BP GO:0019538 protein metabolic process IEP Enrichment
BP GO:0019751 polyol metabolic process IEP Enrichment
MF GO:0019843 rRNA binding IEP Enrichment
BP GO:0034311 diol metabolic process IEP Enrichment
BP GO:0034312 diol biosynthetic process IEP Enrichment
BP GO:0034641 cellular nitrogen compound metabolic process IEP Enrichment
BP GO:0034645 cellular macromolecule biosynthetic process IEP Enrichment
BP GO:0042558 pteridine-containing compound metabolic process IEP Enrichment
BP GO:0042559 pteridine-containing compound biosynthetic process IEP Enrichment
BP GO:0043043 peptide biosynthetic process IEP Enrichment
BP GO:0043170 macromolecule metabolic process IEP Enrichment
BP GO:0043603 cellular amide metabolic process IEP Enrichment
BP GO:0043604 amide biosynthetic process IEP Enrichment
BP GO:0044237 cellular metabolic process IEP Enrichment
BP GO:0044249 cellular biosynthetic process IEP Enrichment
BP GO:0044260 cellular macromolecule metabolic process IEP Enrichment
BP GO:0044267 cellular protein metabolic process IEP Enrichment
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Enrichment
BP GO:0044283 small molecule biosynthetic process IEP Enrichment
MF GO:0045182 translation regulator activity IEP Enrichment
BP GO:0046146 tetrahydrobiopterin metabolic process IEP Enrichment
BP GO:0046165 alcohol biosynthetic process IEP Enrichment
BP GO:0046173 polyol biosynthetic process IEP Enrichment
MF GO:0070402 NADPH binding IEP Enrichment
BP GO:0071704 organic substance metabolic process IEP Enrichment
MF GO:0090079 translation regulator activity, nucleic acid binding IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
BP GO:1901564 organonitrogen compound metabolic process IEP Enrichment
BP GO:1901566 organonitrogen compound biosynthetic process IEP Enrichment
BP GO:1901576 organic substance biosynthetic process IEP Enrichment
BP GO:1901615 organic hydroxy compound metabolic process IEP Enrichment
BP GO:1901617 organic hydroxy compound biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR020784 Ribosomal_L11_N 38 101
IPR020783 Ribosomal_L11_C 106 174
No external refs found!