Cre09.g408200 (30780392)

Aliases : 30780392

Description : RNA processing.RNA splicing.spliceosome-associated non-snRNP factors.RSZ21/22 splicing factor

Gene families : OG_01_0004490 (OrthoFinder) Phylogenetic Tree(s): OG0004490_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Cre09.g408200
Cluster	HCCA: Cluster_126

Target	Alias	Description	ECC score	Gene Family Method
Cpa\|evm.model.tig00000802.14	tig00000802_g4265.t1	No description available	0.06	OrthoFinder
Dusal.0910s00002.1	33197650	RNA recognition motif domain [Interproscan].	0.03	OrthoFinder
lcl\|LHPG02000004.1_cds_PRW59195.1_7504	PRW59195	Serine arginine-rich splicing factor RSZ21-like isoform X1	0.04	OrthoFinder

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0008270	zinc ion binding	IEA	Interproscan
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR001878	Znf_CCHC	103	118
IPR000504	RRM_dom	5	62

External Links

No external refs found!