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  5. Cre09.g407100

Cre09.g407100 (30780731)


Aliases : 30780731

No description available


Gene families : OG_01_0000781 (OrthoFinder) Phylogenetic Tree(s): OG0000781_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre09.g407100
Cluster HCCA: Cluster_28

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00020531.55 tig00020531_g10061.t1 No description available 0.03 OrthoFinder
Cre16.g659950 30778100, PRPS5 Protein biosynthesis.organelle translation... 0.04 OrthoFinder
Cz12g28110.t1 No alias Ribosomal protein S5, C-terminal; Ribosomal protein S5,... 0.04 OrthoFinder
OT_10G02160.1 No alias Ribosomal protein S5, C-terminal; Ribosomal protein S5,... 0.02 OrthoFinder
OT_15G00990.1 No alias Ribosomal protein S5, C-terminal; Ribosomal protein S5,... 0.04 OrthoFinder
Sro1022_g232380.1 Contig2862.g22952 Protein S5 0.06 OrthoFinder
Sro51_chlor_g029640.1 Rps5 Rps5 0.05 OrthoFinder
SymbC1.scaffold2.900 2.900 Ribosomal protein S5, N-terminal; Ribosomal protein S5,... 0.01 OrthoFinder
TPCG02620.1 No alias Ribosomal protein S5, C-terminal; Ribosomal protein S5,... 0.06 OrthoFinder
Transcript_contig_56867 56867 Ribosomal protein S5, N-terminal [Interproscan]. 0.01 OrthoFinder
Vocar.0029s0076.1 32887394 Hypothetical protein 0.02 OrthoFinder
XM_002506775.1 MICPUN_92603, 92603 Ribosomal protein S5, N-terminal; Ribosomal protein S5,... 0.05 OrthoFinder
XM_003061002.1 MicpuC2_48160, 48160 Ribosomal protein S5, C-terminal; Ribosomal protein S5,... 0.03 OrthoFinder
lcl|LHPG02000012.1_cds_PRW44968.1_1935 PRW44968 30S ribosomal S5 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity IEP Enrichment
MF GO:0004408 holocytochrome-c synthase activity IEP Enrichment
MF GO:0004819 glutamine-tRNA ligase activity IEP Enrichment
BP GO:0006694 steroid biosynthetic process IEP Enrichment
BP GO:0008202 steroid metabolic process IEP Enrichment
MF GO:0016229 steroid dehydrogenase activity IEP Enrichment
MF GO:0016846 carbon-sulfur lyase activity IEP Enrichment
MF GO:0033764 steroid dehydrogenase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP Enrichment
InterPro domains Description Start Stop
IPR005324 Ribosomal_S5_C 271 335
IPR013810 Ribosomal_S5_N 195 255
No external refs found!