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  5. Cre09.g405200

Cre09.g405200 (30781496, MRPL13)


Aliases : 30781496, MRPL13

Description : Protein biosynthesis.organelle translation machineries.mitochondrial ribosome.large subunit proteome.mtRPL13 component


Gene families : OG_01_0000958 (OrthoFinder) Phylogenetic Tree(s): OG0000958_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood HRR: Cre09.g405200
Cluster HCCA: Cluster_28

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00020912.24 tig00020912_g15798.t1 50S ribosomal protein L13, chloroplastic OS=Arabidopsis thaliana 0.01 OrthoFinder
Cre06.g264350 30779581, PRPL13 Protein biosynthesis.organelle translation... 0.06 OrthoFinder
Cz04g19090.t1 No alias Ribosomal protein L13 [Interproscan]. 0.04 OrthoFinder
Cz11g15150.t1 No alias Ribosomal protein L13 [Interproscan]. 0.05 OrthoFinder
Dusal.0355s00001.1 33196340 Ribosomal protein L13 [Interproscan]. 0.03 OrthoFinder
OT_03G01410.1 No alias Ribosomal protein L13 [Interproscan]. 0.03 OrthoFinder
OT_06G01030.1 No alias Ribosomal protein L13 [Interproscan]. 0.06 OrthoFinder
Sro874_g214140.1 Contig589.g7365 Protein L13 0.06 OrthoFinder
SymbC1.scaffold113.80 113.80 Ribosomal protein S9; Ribosomal protein L13 [Interproscan]. 0.01 OrthoFinder
TPCG02710.1 No alias Ribosomal protein L13 [Interproscan]. 0.05 OrthoFinder
Vocar.0002s0545.1 32890832 Ribosomal protein L13 [Interproscan]. 0.03 OrthoFinder
Vocar.0062s0012.1 32892907 Ribosomal protein L13 [Interproscan]. 0.02 OrthoFinder
XM_002501391.1 MICPUN_97280, 97280 Ribosomal protein L13 [Interproscan]. 0.05 OrthoFinder
XM_003059440.1 MicpuC2_27251, 27251 Ribosomal protein L13 [Interproscan]. 0.05 OrthoFinder
XM_003062638.1 MicpuC2_7563, 7563 Ribosomal protein L13 [Interproscan]. 0.03 OrthoFinder
lcl|LHPG02000021.1_cds_PRW20835.1_5043 PRW20835 50S ribosomal chloroplastic 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004177 aminopeptidase activity IEP Enrichment
BP GO:0006412 translation IEP Enrichment
BP GO:0006518 peptide metabolic process IEP Enrichment
BP GO:0009059 macromolecule biosynthetic process IEP Enrichment
BP GO:0019538 protein metabolic process IEP Enrichment
BP GO:0034645 cellular macromolecule biosynthetic process IEP Enrichment
BP GO:0043043 peptide biosynthetic process IEP Enrichment
BP GO:0043603 cellular amide metabolic process IEP Enrichment
BP GO:0043604 amide biosynthetic process IEP Enrichment
BP GO:1901566 organonitrogen compound biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR005822 Ribosomal_L13 25 142
No external refs found!