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  5. Cre09.g402450

Cre09.g402450 (30780718)


Aliases : 30780718

Description : Protein degradation.26S proteasome.regulatory particle.ATPase subunits.RPT3 regulatory component


Gene families : OG_01_0002773 (OrthoFinder) Phylogenetic Tree(s): OG0002773_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre09.g402450
Cluster HCCA: Cluster_120

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00022075.46 tig00022075_g23607.t1 26S proteasome regulatory subunit 6B homolog... 0.08 OrthoFinder
Cz12g16250.t1 No alias ATPase, AAA-type, core; Proteasomal ATPase OB C-terminal... 0.06 OrthoFinder
EOD31689 No alias Proteasomal ATPase OB C-terminal domain; AAA ATPase,... 0.04 OrthoFinder
OT_09G02280.1 No alias Proteasomal ATPase OB C-terminal domain; ATPase,... 0.04 OrthoFinder
PTI_06G04080.1 No alias Proteasomal ATPase OB C-terminal domain; ATPase,... 0.18 OrthoFinder
Sro1509_g278540.1 Contig198.g2309 Proteasome regulatory subunit 6B 0.26 OrthoFinder
TP12G01440.1 No alias Proteasomal ATPase OB C-terminal domain; ATPase,... 0.13 OrthoFinder
Transcript_contig_90026 90026 Proteasomal ATPase OB C-terminal domain; ATPase,... 0.06 OrthoFinder
Vocar.0008s0375.1 32897106 Proteasomal ATPase OB C-terminal domain; ATPase,... 0.07 OrthoFinder
XM_002502156.1 MICPUN_108299, 108299 Proteasomal ATPase OB C-terminal domain; AAA ATPase,... 0.03 OrthoFinder
XM_003059502.1 MicpuC2_27327, 27327 Proteasomal ATPase OB C-terminal domain; ATPase,... 0.07 OrthoFinder
lcl|LHPG02000010.1_cds_PRW50984.1_814 PRW50984 26S protease regulatory subunit 6B-like protein 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000151 ubiquitin ligase complex IEP Enrichment
MF GO:0003712 transcription coregulator activity IEP Enrichment
MF GO:0003824 catalytic activity IEP Enrichment
MF GO:0004175 endopeptidase activity IEP Enrichment
MF GO:0004190 aspartic-type endopeptidase activity IEP Enrichment
MF GO:0004298 threonine-type endopeptidase activity IEP Enrichment
CC GO:0005575 cellular_component IEP Enrichment
CC GO:0005839 proteasome core complex IEP Enrichment
BP GO:0006357 regulation of transcription by RNA polymerase II IEP Enrichment
BP GO:0006508 proteolysis IEP Enrichment
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP Enrichment
BP GO:0006807 nitrogen compound metabolic process IEP Enrichment
BP GO:0006904 vesicle docking involved in exocytosis IEP Enrichment
MF GO:0008233 peptidase activity IEP Enrichment
BP GO:0009056 catabolic process IEP Enrichment
BP GO:0009057 macromolecule catabolic process IEP Enrichment
BP GO:0016567 protein ubiquitination IEP Enrichment
MF GO:0016787 hydrolase activity IEP Enrichment
BP GO:0019538 protein metabolic process IEP Enrichment
CC GO:0019773 proteasome core complex, alpha-subunit complex IEP Enrichment
BP GO:0019941 modification-dependent protein catabolic process IEP Enrichment
BP GO:0022406 membrane docking IEP Enrichment
BP GO:0032446 protein modification by small protein conjugation IEP Enrichment
CC GO:0032991 protein-containing complex IEP Enrichment
BP GO:0043170 macromolecule metabolic process IEP Enrichment
BP GO:0043632 modification-dependent macromolecule catabolic process IEP Enrichment
BP GO:0044248 cellular catabolic process IEP Enrichment
BP GO:0044260 cellular macromolecule metabolic process IEP Enrichment
BP GO:0044265 cellular macromolecule catabolic process IEP Enrichment
BP GO:0048278 vesicle docking IEP Enrichment
BP GO:0051603 proteolysis involved in cellular protein catabolic process IEP Enrichment
BP GO:0051640 organelle localization IEP Enrichment
MF GO:0070001 aspartic-type peptidase activity IEP Enrichment
MF GO:0070003 threonine-type peptidase activity IEP Enrichment
BP GO:0140029 exocytic process IEP Enrichment
BP GO:0140056 organelle localization by membrane tethering IEP Enrichment
MF GO:0140096 catalytic activity, acting on a protein IEP Enrichment
CC GO:0140535 intracellular protein-containing complex IEP Enrichment
BP GO:1901564 organonitrogen compound metabolic process IEP Enrichment
BP GO:1901575 organic substance catabolic process IEP Enrichment
CC GO:1990234 transferase complex IEP Enrichment
InterPro domains Description Start Stop
IPR003959 ATPase_AAA_core 198 330
IPR041569 AAA_lid_3 354 396
IPR032501 Prot_ATP_ID_OB 85 140
No external refs found!