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  5. Cre09.g400650

Cre09.g400650 (30780656, RPS6)


Aliases : 30780656, RPS6

Description : Protein biosynthesis.cytosolic ribosome.small subunit (SSU).SSU proteome.RPS6 component


Gene families : OG_01_0002771 (OrthoFinder) Phylogenetic Tree(s): OG0002771_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood HRR: Cre09.g400650
Cluster HCCA: Cluster_32

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000704.73 tig00000704_g3357.t1 Protein biosynthesis.cytosolic ribosome.small subunit... 0.2 OrthoFinder
Cz06g36040.t1 No alias Ribosomal protein S6e [Interproscan]. 0.27 OrthoFinder
Dusal.0276s00013.1 33203073 Ribosomal protein S6e [Interproscan]. 0.07 OrthoFinder
EOD22278 No alias Ribosomal protein S6e [Interproscan]. 0.1 OrthoFinder
OT_03G02800.1 No alias Ribosomal protein S6e [Interproscan]. 0.19 OrthoFinder
PTI_03G02600.1 No alias Ribosomal protein S6e [Interproscan]. 0.18 OrthoFinder
Sro169_g075080.1 Contig4412.g33128 40S ribosomal protein S6 0.21 OrthoFinder
SymbC1.scaffold2867.6 2867.6 Ribosomal protein S6e [Interproscan]. 0.05 OrthoFinder
TP14G02490.1 No alias Ribosomal protein S6e [Interproscan]. 0.23 OrthoFinder
Transcript_contig_80061 80061 Ribosomal protein S6e [Interproscan]. 0.08 OrthoFinder
Vocar.0008s0246.1 32896957 Ribosomal protein S6e [Interproscan]. 0.15 OrthoFinder
XM_002499404.1 MICPUN_90125, 90125 Ribosomal protein S6e [Interproscan]. 0.19 OrthoFinder
XM_003055713.1 MicpuC2_49409, 49409 Ribosomal protein S6e [Interproscan]. 0.1 OrthoFinder
lcl|BLLF01000178.1_cds_GFH08697.1_3174 HaLaN_03704, GFH08697 40S ribosomal protein S6 0.15 OrthoFinder
lcl|LHPG02000012.1_cds_PRW44964.1_1851 PRW44964 40S ribosomal S6 isoform A 0.14 OrthoFinder
lcl|VRMN01000005.1_cds_KAA8494269.1_4133 KAA8494269 40S ribosomal protein S6 0.16 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006412 translation IEP Enrichment
BP GO:0006518 peptide metabolic process IEP Enrichment
BP GO:0006807 nitrogen compound metabolic process IEP Enrichment
BP GO:0008150 biological_process IEP Enrichment
BP GO:0008152 metabolic process IEP Enrichment
BP GO:0009058 biosynthetic process IEP Enrichment
BP GO:0009059 macromolecule biosynthetic process IEP Enrichment
BP GO:0009987 cellular process IEP Enrichment
BP GO:0019538 protein metabolic process IEP Enrichment
BP GO:0034641 cellular nitrogen compound metabolic process IEP Enrichment
BP GO:0034645 cellular macromolecule biosynthetic process IEP Enrichment
BP GO:0043043 peptide biosynthetic process IEP Enrichment
BP GO:0043170 macromolecule metabolic process IEP Enrichment
BP GO:0043603 cellular amide metabolic process IEP Enrichment
BP GO:0043604 amide biosynthetic process IEP Enrichment
BP GO:0044237 cellular metabolic process IEP Enrichment
BP GO:0044238 primary metabolic process IEP Enrichment
BP GO:0044249 cellular biosynthetic process IEP Enrichment
BP GO:0044260 cellular macromolecule metabolic process IEP Enrichment
BP GO:0044267 cellular protein metabolic process IEP Enrichment
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Enrichment
BP GO:0071704 organic substance metabolic process IEP Enrichment
BP GO:1901564 organonitrogen compound metabolic process IEP Enrichment
BP GO:1901566 organonitrogen compound biosynthetic process IEP Enrichment
BP GO:1901576 organic substance biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR001377 Ribosomal_S6e 1 128
No external refs found!