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  5. Cre09.g400441

Cre09.g400441 (30780243)


Aliases : 30780243

Description : RNA biosynthesis.transcriptional activation.JUMONJI transcription factor


Gene families : OG_01_0000384 (OrthoFinder) Phylogenetic Tree(s): OG0000384_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre09.g400441
Cluster HCCA: Cluster_112

Target Alias Description ECC score Gene Family Method Actions
Cz10g20160.t1 No alias Cupin-like domain 8 [Interproscan]. 0.02 OrthoFinder
EOD09928 No alias Cupin-like domain 8; F-box domain [Interproscan]. 0.02 OrthoFinder
EOD10232 No alias F-box domain [Interproscan]. 0.02 OrthoFinder
OT_03G03930.1 No alias Cupin-like domain 8 [Interproscan]. 0.03 OrthoFinder
OT_18G01700.1 No alias Cupin-like domain 8 [Interproscan]. 0.03 OrthoFinder
Transcript_contig_56602 56602 Cupin-like domain 8 [Interproscan]. 0.03 OrthoFinder
Vocar.0016s0143.1 32898213 Cupin-like domain 8 [Interproscan]. 0.02 OrthoFinder
lcl|LHPG02000005.1_cds_PRW58470.1_7703 PRW58470 Clavaminate synthase 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0001522 pseudouridine synthesis IEP Enrichment
BP GO:0006810 transport IEP Enrichment
BP GO:0006886 intracellular protein transport IEP Enrichment
BP GO:0008104 protein localization IEP Enrichment
MF GO:0009982 pseudouridine synthase activity IEP Enrichment
BP GO:0015031 protein transport IEP Enrichment
MF GO:0016866 intramolecular transferase activity IEP Enrichment
BP GO:0033036 macromolecule localization IEP Enrichment
BP GO:0045184 establishment of protein localization IEP Enrichment
BP GO:0046907 intracellular transport IEP Enrichment
BP GO:0051179 localization IEP Enrichment
BP GO:0051234 establishment of localization IEP Enrichment
BP GO:0051641 cellular localization IEP Enrichment
BP GO:0051649 establishment of localization in cell IEP Enrichment
BP GO:0071702 organic substance transport IEP Enrichment
BP GO:0071705 nitrogen compound transport IEP Enrichment
InterPro domains Description Start Stop
IPR003347 JmjC_dom 214 323
No external refs found!